Gene annotation
Transcriptome id Sobic.010G059800.1
Synonym Sb10g005170
Functional annotation hydroxylase, putative, expressed
UniProt C5Z5D3
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF139
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G20550 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os06g08014.1 : hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a042866
Brachypodium KQJ87421 , KQK19355
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
3 Sobic.006G246100 one cut domain family member 3, putative, expressed -
4 Sobic.008G188000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
5 Sobic.010G052600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.010G135200 - -
7 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
8 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
9 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.001G040400 EF hand family protein, putative, expressed -
11 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.003G254900 no apical meristem protein, putative, expressed -
14 Sobic.003G135700 - -
15 Sobic.010G045700 "SbWRKY30 enhances the drought tolerance of plants and regulates a drought stress-responsive gene, SbRD19, in sorghum"(PubMedID : 32112957)@WRKY113, expressed -
16 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
17 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
20 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -


Gene co-expression network
sample Sobic010G059800 Sobic010G059800 Sobic001G059400 Sobic001G059400 Sobic010G059800--Sobic001G059400 Sobic007G115500 Sobic007G115500 Sobic010G059800--Sobic007G115500 Sobic006G246100 Sobic006G246100 Sobic010G059800--Sobic006G246100 Sobic008G188000 Sobic008G188000 Sobic010G059800--Sobic008G188000 Sobic010G052600 Sobic010G052600 Sobic010G059800--Sobic010G052600 Sobic010G135200 Sobic010G135200 Sobic010G059800--Sobic010G135200 Sobic002G138700 Sobic002G138700 Sobic010G059800--Sobic002G138700 Sobic010G083600 Sobic010G083600 Sobic010G059800--Sobic010G083600 Sobic004G192100 Sobic004G192100 Sobic010G059800--Sobic004G192100 Sobic004G297100 Sobic004G297100 Sobic001G059400--Sobic004G297100 Sobic001G059400--Sobic010G083600 Sobic002G199500 Sobic002G199500 Sobic001G059400--Sobic002G199500 Sobic007G090300 Sobic007G090300 Sobic001G059400--Sobic007G090300 Sobic010G102150 Sobic010G102150 Sobic001G059400--Sobic010G102150 Sobic001G195100 Sobic001G195100 Sobic001G059400--Sobic001G195100 Sobic002G377100 Sobic002G377100 Sobic001G059400--Sobic002G377100 Sobic010G163000 Sobic010G163000 Sobic001G059400--Sobic010G163000 Sobic001G059400--Sobic008G188000 Sobic003G228200 Sobic003G228200 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic005G080200 Sobic005G080200 Sobic007G115500--Sobic005G080200 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic008G188000--Sobic004G297100 Sobic008G188000--Sobic001G059400 Sobic003G277500 Sobic003G277500 Sobic008G188000--Sobic003G277500 Sobic004G101000 Sobic004G101000 Sobic008G188000--Sobic004G101000 Sobic006G265000 Sobic006G265000 Sobic008G188000--Sobic006G265000 Sobic004G140000 Sobic004G140000 Sobic008G188000--Sobic004G140000 Sobic008G188000--Sobic001G195100 Sobic008G188000--Sobic002G377100 Sobic008G188000--Sobic004G195000 Sobic003G352400 Sobic003G352400 Sobic010G052600--Sobic003G352400 Sobic006G044932 Sobic006G044932 Sobic010G052600--Sobic006G044932 Sobic003G082600 Sobic003G082600 Sobic010G052600--Sobic003G082600 Sobic002G373001 Sobic002G373001 Sobic010G052600--Sobic002G373001 Sobic002G214800 Sobic002G214800 Sobic010G052600--Sobic002G214800 Sobic010G052600--Sobic003G277500 Sobic001G530350 Sobic001G530350 Sobic010G052600--Sobic001G530350 Sobic006G138500 Sobic006G138500 Sobic010G052600--Sobic006G138500 Sobic010G041700 Sobic010G041700 Sobic010G052600--Sobic010G041700 Sobic004G209500 Sobic004G209500 Sobic010G135200--Sobic004G209500 Sobic009G216050 Sobic009G216050 Sobic010G135200--Sobic009G216050 Sobic003G310500 Sobic003G310500 Sobic010G135200--Sobic003G310500 Sobic005G144450 Sobic005G144450 Sobic010G135200--Sobic005G144450 Sobic002G407200 Sobic002G407200 Sobic010G135200--Sobic002G407200 Sobic008G038100 Sobic008G038100 Sobic010G135200--Sobic008G038100 Sobic003G385500 Sobic003G385500 Sobic010G135200--Sobic003G385500 Sobic002G216500 Sobic002G216500 Sobic010G135200--Sobic002G216500 Sobic006G045000 Sobic006G045000 Sobic010G135200--Sobic006G045000 Sobic006G259000 Sobic006G259000 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic002G138700--Sobic007G090300 Sobic004G086800 Sobic004G086800 Sobic002G138700--Sobic004G086800 Sobic010G102000 Sobic010G102000 Sobic002G138700--Sobic010G102000 Sobic002G138700--Sobic001G195100 Sobic003G416500 Sobic003G416500 Sobic002G138700--Sobic003G416500 Sobic009G010400 Sobic009G010400 Sobic002G138700--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic002G138700--Sobic001G287600 Sobic010G209100 Sobic010G209100 Sobic010G083600--Sobic010G209100 Sobic005G109000 Sobic005G109000 Sobic010G083600--Sobic005G109000 Sobic010G083600--Sobic001G059400 Sobic003G341100 Sobic003G341100 Sobic010G083600--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic010G083600--Sobic009G217500 Sobic006G066200 Sobic006G066200 Sobic010G083600--Sobic006G066200 Sobic010G083600--Sobic003G352400 Sobic003G430400 Sobic003G430400 Sobic010G083600--Sobic003G430400 Sobic007G077100 Sobic007G077100 Sobic010G083600--Sobic007G077100 Sobic010G052700 Sobic010G052700 Sobic004G192100--Sobic010G052700 Sobic009G077800 Sobic009G077800 Sobic004G192100--Sobic009G077800 Sobic009G221400 Sobic009G221400 Sobic004G192100--Sobic009G221400 Sobic001G091600 Sobic001G091600 Sobic004G192100--Sobic001G091600 Sobic003G297600 Sobic003G297600 Sobic004G192100--Sobic003G297600 Sobic002G353900 Sobic002G353900 Sobic004G192100--Sobic002G353900 Sobic007G025500 Sobic007G025500 Sobic004G192100--Sobic007G025500 Sobic002G302500 Sobic002G302500 Sobic004G192100--Sobic002G302500 Sobic002G004900 Sobic002G004900 Sobic004G192100--Sobic002G004900
Octagon: transcription factors


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