Gene annotation
Transcriptome id Sobic.010G045700.1
Synonym ATWRKY53, Sb10g004000, WRKY53, SbWRKY30
Functional annotation "SbWRKY30 enhances the drought tolerance of plants and regulates a drought stress-responsive gene, SbRD19, in sorghum" (PubMedID : 32112957)
WRKY113, expressed
UniProt C5Z4F2
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G23810 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os06g06360.1 : WRKY113, expressed
MaizeGDB (Corn) Zm00025a028194 , Zm00025a038706 , Zm00025a049975 , Zm00025a030972 , Zm00025a006015
Brachypodium KQK04778 , KQK09011 , KQK09010 , KQK04775 , PNT76490
Barley HORVU1Hr1G090110.1 , HORVU1Hr1G090130.4 , HORVU1Hr1G090130.2
Wheat TraesCS7A02G116000 , TraesCS7D02G110600 , TraesCS7B02G012600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
2 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
3 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
4 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
5 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
6 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.004G053200 Cupin domain containing protein, expressed -
8 Sobic.001G097700 - -
9 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.003G111500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
11 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
12 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
14 Sobic.010G209100 WRKY28, expressed -
15 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
16 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
17 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
19 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
20 Sobic.003G296700 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G045700 Sobic010G045700 Sobic010G083600 Sobic010G083600 Sobic010G045700--Sobic010G083600 Sobic003G341100 Sobic003G341100 Sobic010G045700--Sobic003G341100 Sobic003G352400 Sobic003G352400 Sobic010G045700--Sobic003G352400 Sobic004G297200 Sobic004G297200 Sobic010G045700--Sobic004G297200 Sobic009G044400 Sobic009G044400 Sobic010G045700--Sobic009G044400 Sobic001G341600 Sobic001G341600 Sobic010G045700--Sobic001G341600 Sobic004G053200 Sobic004G053200 Sobic010G045700--Sobic004G053200 Sobic001G097700 Sobic001G097700 Sobic010G045700--Sobic001G097700 Sobic008G036000 Sobic008G036000 Sobic010G045700--Sobic008G036000 Sobic010G209100 Sobic010G209100 Sobic010G083600--Sobic010G209100 Sobic005G109000 Sobic005G109000 Sobic010G083600--Sobic005G109000 Sobic001G059400 Sobic001G059400 Sobic010G083600--Sobic001G059400 Sobic010G083600--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic010G083600--Sobic009G217500 Sobic006G066200 Sobic006G066200 Sobic010G083600--Sobic006G066200 Sobic010G083600--Sobic003G352400 Sobic003G430400 Sobic003G430400 Sobic010G083600--Sobic003G430400 Sobic007G077100 Sobic007G077100 Sobic010G083600--Sobic007G077100 Sobic003G341100--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic010G102000 Sobic010G102000 Sobic003G341100--Sobic010G102000 Sobic003G341100--Sobic001G341600 Sobic006G273800 Sobic006G273800 Sobic003G341100--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic003G341100--Sobic010G023200 Sobic002G118600 Sobic002G118600 Sobic003G341100--Sobic002G118600 Sobic003G352400--Sobic003G341100 Sobic003G352400--Sobic002G118600 Sobic003G352400--Sobic010G083600 Sobic007G090300 Sobic007G090300 Sobic003G352400--Sobic007G090300 Sobic003G352400--Sobic005G109000 Sobic003G352400--Sobic010G102000 Sobic003G352400--Sobic001G341600 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic010G200700 Sobic010G200700 Sobic004G297200--Sobic010G200700 Sobic010G175200 Sobic010G175200 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G042600 Sobic004G042600 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic003G012800 Sobic003G012800 Sobic004G297200--Sobic003G012800 Sobic003G363200 Sobic003G363200 Sobic004G297200--Sobic003G363200 Sobic009G066800 Sobic009G066800 Sobic004G297200--Sobic009G066800 Sobic004G297200--Sobic009G044400 Sobic009G044400--Sobic003G341100 Sobic006G078400 Sobic006G078400 Sobic009G044400--Sobic006G078400 Sobic009G044400--Sobic009G217500 Sobic009G044400--Sobic007G145700 Sobic009G044400--Sobic006G273800 Sobic009G044400--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G044400--Sobic001G035000 Sobic003G361100 Sobic003G361100 Sobic009G044400--Sobic003G361100 Sobic001G192800 Sobic001G192800 Sobic009G044400--Sobic001G192800 Sobic009G217600 Sobic009G217600 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G189700 Sobic001G189700 Sobic004G053200--Sobic001G189700 Sobic001G290400 Sobic001G290400 Sobic004G053200--Sobic001G290400 Sobic004G280800 Sobic004G280800 Sobic004G053200--Sobic004G280800 Sobic003G338900 Sobic003G338900 Sobic004G053200--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic004G053200--Sobic001G473900 Sobic004G025000 Sobic004G025000 Sobic004G053200--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic004G053200--Sobic001G476400 Sobic001G081600 Sobic001G081600 Sobic004G053200--Sobic001G081600 Sobic006G095600 Sobic006G095600 Sobic004G053200--Sobic006G095600 Sobic001G390700 Sobic001G390700 Sobic001G097700--Sobic001G390700 Sobic001G095700 Sobic001G095700 Sobic001G097700--Sobic001G095700 Sobic001G097700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G097700--Sobic002G294600 Sobic001G097700--Sobic009G044400 Sobic001G097700--Sobic004G297200 Sobic001G097700--Sobic007G145700 Sobic001G064900 Sobic001G064900 Sobic001G097700--Sobic001G064900 Sobic006G146500 Sobic006G146500 Sobic001G097700--Sobic006G146500 Sobic002G197600 Sobic002G197600 Sobic008G036000--Sobic002G197600 Sobic001G209800 Sobic001G209800 Sobic008G036000--Sobic001G209800 Sobic008G036000--Sobic003G268700 Sobic010G076600 Sobic010G076600 Sobic008G036000--Sobic010G076600 Sobic003G158600 Sobic003G158600 Sobic008G036000--Sobic003G158600 Sobic001G462800 Sobic001G462800 Sobic008G036000--Sobic001G462800 Sobic008G036000--Sobic001G077400 Sobic004G084100 Sobic004G084100 Sobic008G036000--Sobic004G084100 Sobic002G036100 Sobic002G036100 Sobic008G036000--Sobic002G036100
Octagon: transcription factors


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