Gene annotation
Transcriptome id Sobic.001G097700.1
Synonym
Functional annotation -
UniProt A0A1B6QI67
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390700 VQ domain containing protein, putative, expressed -
2 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
4 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
5 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
6 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
7 Sobic.007G145700 expressed protein -
8 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
9 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
10 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
11 Sobic.010G045700 "SbWRKY30 enhances the drought tolerance of plants and regulates a drought stress-responsive gene, SbRD19, in sorghum"(PubMedID : 32112957)@WRKY113, expressed -
12 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
13 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
16 Sobic.002G335100 expressed protein -
17 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
18 Sobic.009G212800 WRKY7, expressed -
19 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
20 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G097700 Sobic001G097700 Sobic001G390700 Sobic001G390700 Sobic001G097700--Sobic001G390700 Sobic001G095700 Sobic001G095700 Sobic001G097700--Sobic001G095700 Sobic003G341100 Sobic003G341100 Sobic001G097700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G097700--Sobic002G294600 Sobic009G044400 Sobic009G044400 Sobic001G097700--Sobic009G044400 Sobic004G297200 Sobic004G297200 Sobic001G097700--Sobic004G297200 Sobic007G145700 Sobic007G145700 Sobic001G097700--Sobic007G145700 Sobic001G064900 Sobic001G064900 Sobic001G097700--Sobic001G064900 Sobic006G146500 Sobic006G146500 Sobic001G097700--Sobic006G146500 Sobic001G390700--Sobic001G095700 Sobic001G390700--Sobic001G097700 Sobic001G390700--Sobic003G341100 Sobic001G390700--Sobic009G044400 Sobic004G065900 Sobic004G065900 Sobic001G390700--Sobic004G065900 Sobic007G077100 Sobic007G077100 Sobic001G390700--Sobic007G077100 Sobic002G232800 Sobic002G232800 Sobic001G390700--Sobic002G232800 Sobic010G023200 Sobic010G023200 Sobic001G390700--Sobic010G023200 Sobic003G268900 Sobic003G268900 Sobic001G390700--Sobic003G268900 Sobic001G095700--Sobic004G065900 Sobic001G095700--Sobic003G268900 Sobic001G095700--Sobic002G294600 Sobic002G367900 Sobic002G367900 Sobic001G095700--Sobic002G367900 Sobic001G095700--Sobic007G145700 Sobic006G273800 Sobic006G273800 Sobic001G095700--Sobic006G273800 Sobic007G051800 Sobic007G051800 Sobic001G095700--Sobic007G051800 Sobic001G095700--Sobic001G064900 Sobic001G095700--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic010G102000 Sobic010G102000 Sobic003G341100--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic003G341100--Sobic010G023200 Sobic002G118600 Sobic002G118600 Sobic003G341100--Sobic002G118600 Sobic002G294600--Sobic007G145700 Sobic001G462800 Sobic001G462800 Sobic002G294600--Sobic001G462800 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic002G294600--Sobic004G065900 Sobic002G217100 Sobic002G217100 Sobic002G294600--Sobic002G217100 Sobic002G294600--Sobic003G341100 Sobic002G294600--Sobic006G146500 Sobic001G118900 Sobic001G118900 Sobic002G294600--Sobic001G118900 Sobic009G044400--Sobic003G341100 Sobic006G078400 Sobic006G078400 Sobic009G044400--Sobic006G078400 Sobic009G044400--Sobic009G217500 Sobic009G044400--Sobic007G145700 Sobic009G044400--Sobic006G273800 Sobic009G044400--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G044400--Sobic001G035000 Sobic003G361100 Sobic003G361100 Sobic009G044400--Sobic003G361100 Sobic001G192800 Sobic001G192800 Sobic009G044400--Sobic001G192800 Sobic010G200700 Sobic010G200700 Sobic004G297200--Sobic010G200700 Sobic010G175200 Sobic010G175200 Sobic004G297200--Sobic010G175200 Sobic009G247300 Sobic009G247300 Sobic004G297200--Sobic009G247300 Sobic004G042600 Sobic004G042600 Sobic004G297200--Sobic004G042600 Sobic003G268700 Sobic003G268700 Sobic004G297200--Sobic003G268700 Sobic003G012800 Sobic003G012800 Sobic004G297200--Sobic003G012800 Sobic003G363200 Sobic003G363200 Sobic004G297200--Sobic003G363200 Sobic009G066800 Sobic009G066800 Sobic004G297200--Sobic009G066800 Sobic004G297200--Sobic009G044400 Sobic007G145700--Sobic003G341100 Sobic007G145700--Sobic002G294600 Sobic007G145700--Sobic010G102000 Sobic007G145700--Sobic001G462800 Sobic007G145700--Sobic006G146500 Sobic007G145700--Sobic009G217500 Sobic007G145700--Sobic001G095700 Sobic007G145700--Sobic009G044400 Sobic007G145700--Sobic006G273800 Sobic001G064900--Sobic010G102000 Sobic001G064900--Sobic009G217500 Sobic001G064900--Sobic006G273800 Sobic001G064900--Sobic010G023200 Sobic006G257700 Sobic006G257700 Sobic001G064900--Sobic006G257700 Sobic006G259000 Sobic006G259000 Sobic001G064900--Sobic006G259000 Sobic001G064900--Sobic007G077100 Sobic001G064900--Sobic001G095700 Sobic001G064900--Sobic003G341100 Sobic003G425200 Sobic003G425200 Sobic006G146500--Sobic003G425200 Sobic006G146500--Sobic004G065900 Sobic006G146500--Sobic007G145700 Sobic006G146500--Sobic003G341100 Sobic002G207300 Sobic002G207300 Sobic006G146500--Sobic002G207300 Sobic006G146500--Sobic002G294600 Sobic007G201100 Sobic007G201100 Sobic006G146500--Sobic007G201100 Sobic006G146500--Sobic002G367900 Sobic001G081600 Sobic001G081600 Sobic006G146500--Sobic001G081600
Octagon: transcription factors


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