Gene annotation
Transcriptome id Sobic.010G135200.1
Synonym
Functional annotation -
UniProt A0A194YIX7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G216050 - -
3 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
4 Sobic.005G144450 - -
5 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
6 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G385500 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
8 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.006G045000 drought-induced protein 1, putative, expressed -
10 Sobic.004G333300 serine-rich protein, putative, expressed -
11 Sobic.008G181300 expressed protein -
12 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
13 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
14 Sobic.010G171501 - -
15 Sobic.010G059800 hydroxylase, putative, expressed -
16 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
19 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
20 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic010G135200 Sobic010G135200 Sobic004G209500 Sobic004G209500 Sobic010G135200--Sobic004G209500 Sobic009G216050 Sobic009G216050 Sobic010G135200--Sobic009G216050 Sobic003G310500 Sobic003G310500 Sobic010G135200--Sobic003G310500 Sobic005G144450 Sobic005G144450 Sobic010G135200--Sobic005G144450 Sobic002G407200 Sobic002G407200 Sobic010G135200--Sobic002G407200 Sobic008G038100 Sobic008G038100 Sobic010G135200--Sobic008G038100 Sobic003G385500 Sobic003G385500 Sobic010G135200--Sobic003G385500 Sobic002G216500 Sobic002G216500 Sobic010G135200--Sobic002G216500 Sobic006G045000 Sobic006G045000 Sobic010G135200--Sobic006G045000 Sobic004G209500--Sobic009G216050 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic004G209500--Sobic003G310500 Sobic005G085500 Sobic005G085500 Sobic004G209500--Sobic005G085500 Sobic009G233900 Sobic009G233900 Sobic004G209500--Sobic009G233900 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G217700 Sobic004G217700 Sobic004G209500--Sobic004G217700 Sobic009G216050--Sobic004G209500 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic004G101000 Sobic004G101000 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic001G056500 Sobic001G056500 Sobic003G310500--Sobic001G056500 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic008G181300 Sobic008G181300 Sobic003G310500--Sobic008G181300 Sobic006G014700 Sobic006G014700 Sobic003G310500--Sobic006G014700 Sobic005G144450--Sobic005G085500 Sobic005G144450--Sobic002G209100 Sobic005G144450--Sobic004G209500 Sobic002G041800 Sobic002G041800 Sobic005G144450--Sobic002G041800 Sobic004G195800 Sobic004G195800 Sobic005G144450--Sobic004G195800 Sobic009G038200 Sobic009G038200 Sobic005G144450--Sobic009G038200 Sobic005G063900 Sobic005G063900 Sobic005G144450--Sobic005G063900 Sobic002G423600 Sobic002G423600 Sobic005G144450--Sobic002G423600 Sobic005G144450--Sobic009G216050 Sobic008G018600 Sobic008G018600 Sobic002G407200--Sobic008G018600 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic002G407200--Sobic004G217700 Sobic002G407200--Sobic004G101000 Sobic001G314800 Sobic001G314800 Sobic002G407200--Sobic001G314800 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic002G407200--Sobic008G038100 Sobic008G038100--Sobic001G056500 Sobic008G038100--Sobic003G310500 Sobic008G038100--Sobic009G216050 Sobic009G014600 Sobic009G014600 Sobic008G038100--Sobic009G014600 Sobic008G038100--Sobic009G233900 Sobic008G038100--Sobic008G181300 Sobic008G038100--Sobic004G217700 Sobic008G038100--Sobic003G385500 Sobic008G038100--Sobic006G045000 Sobic003G385500--Sobic006G045000 Sobic005G182701 Sobic005G182701 Sobic003G385500--Sobic005G182701 Sobic001G056400 Sobic001G056400 Sobic003G385500--Sobic001G056400 Sobic007G055600 Sobic007G055600 Sobic003G385500--Sobic007G055600 Sobic003G385500--Sobic009G014600 Sobic003G385500--Sobic001G056500 Sobic007G076000 Sobic007G076000 Sobic003G385500--Sobic007G076000 Sobic003G385500--Sobic008G038100 Sobic001G410450 Sobic001G410450 Sobic003G385500--Sobic001G410450 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic002G216500--Sobic004G209500 Sobic002G216500--Sobic006G014700 Sobic003G378301 Sobic003G378301 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic002G216500--Sobic004G217700 Sobic006G045000--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700
Octagon: transcription factors


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