Gene annotation
Transcriptome id Sobic.002G202800.2,Sobic.002G202800.1
Synonym WRKY40, ATWRKY40, Sb02g024765
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY62, expressed
UniProt A0A1B6QCJ1 , A0A1B6QCJ2
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G80840 : WRKY DNA-binding protein 40
RAP-DB (Rice) LOC_Os09g25070.1 : WRKY62, expressed
MaizeGDB (Corn) Zm00025a013905 , Zm00025a047002 , Zm00025a047001
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G258700 expressed protein -
2 Sobic.002G064200 expressed protein -
3 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
4 Sobic.003G325100 NB-ARC domain containing protein, expressed -
5 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
8 Sobic.001G363200 expressed protein -
9 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
10 Sobic.004G160300 expressed protein -
11 Sobic.004G138400 WRKY51, expressed -
12 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
13 Sobic.002G173900 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
14 Sobic.008G181801 - -
15 Sobic.001G330925 - -
16 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
17 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
18 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
19 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
20 Sobic.001G381300 WRKY79, expressed -


Gene co-expression network
sample Sobic002G202800 Sobic002G202800 Sobic003G258700 Sobic003G258700 Sobic002G202800--Sobic003G258700 Sobic002G064200 Sobic002G064200 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic003G325100 Sobic003G325100 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic003G242800 Sobic003G242800 Sobic002G202800--Sobic003G242800 Sobic001G363200 Sobic001G363200 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic004G160300 Sobic004G160300 Sobic003G258700--Sobic004G160300 Sobic003G258700--Sobic002G202800 Sobic003G258700--Sobic001G363200 Sobic005G165900 Sobic005G165900 Sobic003G258700--Sobic005G165900 Sobic004G181200 Sobic004G181200 Sobic003G258700--Sobic004G181200 Sobic003G291700 Sobic003G291700 Sobic003G258700--Sobic003G291700 Sobic003G258700--Sobic003G242800 Sobic002G386200 Sobic002G386200 Sobic003G258700--Sobic002G386200 Sobic003G258700--Sobic003G037100 Sobic002G064200--Sobic002G202800 Sobic002G064200--Sobic009G115500 Sobic010G172300 Sobic010G172300 Sobic002G064200--Sobic010G172300 Sobic002G064200--Sobic002G202700 Sobic010G225500 Sobic010G225500 Sobic002G064200--Sobic010G225500 Sobic002G130500 Sobic002G130500 Sobic002G064200--Sobic002G130500 Sobic002G173900 Sobic002G173900 Sobic002G064200--Sobic002G173900 Sobic006G007450 Sobic006G007450 Sobic002G064200--Sobic006G007450 Sobic002G064200--Sobic001G363200 Sobic002G354400--Sobic002G202800 Sobic002G354400--Sobic003G037100 Sobic002G354400--Sobic001G363200 Sobic002G354400--Sobic004G181200 Sobic002G354400--Sobic004G160300 Sobic002G354400--Sobic003G258700 Sobic002G241250 Sobic002G241250 Sobic002G354400--Sobic002G241250 Sobic009G241500 Sobic009G241500 Sobic002G354400--Sobic009G241500 Sobic006G246200 Sobic006G246200 Sobic002G354400--Sobic006G246200 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic005G226100 Sobic005G226100 Sobic003G037100--Sobic005G226100 Sobic002G269032 Sobic002G269032 Sobic003G037100--Sobic002G269032 Sobic008G181801 Sobic008G181801 Sobic003G037100--Sobic008G181801 Sobic003G037100--Sobic009G241500 Sobic001G259500 Sobic001G259500 Sobic003G037100--Sobic001G259500 Sobic009G115500--Sobic002G064200 Sobic010G046900 Sobic010G046900 Sobic009G115500--Sobic010G046900 Sobic009G115500--Sobic002G202800 Sobic009G115500--Sobic002G130500 Sobic009G115500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic009G115500--Sobic009G115300 Sobic009G115500--Sobic002G173900 Sobic009G173800 Sobic009G173800 Sobic009G115500--Sobic009G173800 Sobic006G123400 Sobic006G123400 Sobic009G115500--Sobic006G123400 Sobic003G242800--Sobic002G202800 Sobic003G242800--Sobic003G258700 Sobic003G242800--Sobic004G138400 Sobic003G242800--Sobic003G325100 Sobic003G242800--Sobic002G064200 Sobic003G242800--Sobic005G165900 Sobic003G242800--Sobic004G160300 Sobic003G242800--Sobic001G363200 Sobic001G330925 Sobic001G330925 Sobic003G242800--Sobic001G330925 Sobic001G363200--Sobic004G160300 Sobic001G363200--Sobic004G181200 Sobic001G363200--Sobic002G354400 Sobic001G363200--Sobic003G258700 Sobic001G363200--Sobic002G202800 Sobic001G363200--Sobic002G173900 Sobic001G363200--Sobic002G064200 Sobic001G363200--Sobic003G037100 Sobic003G256000 Sobic003G256000 Sobic001G363200--Sobic003G256000 Sobic002G108400 Sobic002G108400 Sobic002G202700--Sobic002G108400 Sobic009G115400 Sobic009G115400 Sobic002G202700--Sobic009G115400 Sobic001G201800 Sobic001G201800 Sobic002G202700--Sobic001G201800 Sobic002G202700--Sobic009G115300 Sobic002G202700--Sobic010G225500 Sobic001G012000 Sobic001G012000 Sobic002G202700--Sobic001G012000 Sobic006G005400 Sobic006G005400 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic006G005500 Sobic006G005500 Sobic002G202700--Sobic006G005500
Octagon: transcription factors


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