Gene annotation
Transcriptome id Sobic.002G195100.1
Synonym
Functional annotation -
UniProt A0A1B6QCD6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G006700 - -
2 Sobic.002G195200 - -
3 Sobic.004G245300 - -
4 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
5 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -
6 Sobic.003G237600 expressed protein -
7 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
8 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
9 Sobic.007G214300 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.007G226200 - -
11 Sobic.002G195300 - -
12 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
14 Sobic.004G035700 - -
15 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
16 Sobic.001G098600 expressed protein -
17 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.004G223500 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.001G068400 - -
20 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -


Gene co-expression network
sample Sobic002G195100 Sobic002G195100 Sobic006G006700 Sobic006G006700 Sobic002G195100--Sobic006G006700 Sobic002G195200 Sobic002G195200 Sobic002G195100--Sobic002G195200 Sobic004G245300 Sobic004G245300 Sobic002G195100--Sobic004G245300 Sobic005G065500 Sobic005G065500 Sobic002G195100--Sobic005G065500 Sobic002G023000 Sobic002G023000 Sobic002G195100--Sobic002G023000 Sobic003G237600 Sobic003G237600 Sobic002G195100--Sobic003G237600 Sobic001G189100 Sobic001G189100 Sobic002G195100--Sobic001G189100 Sobic007G214300 Sobic007G214300 Sobic002G195100--Sobic007G214300 Sobic006G006700--Sobic002G195100 Sobic003G231800 Sobic003G231800 Sobic006G006700--Sobic003G231800 Sobic010G183100 Sobic010G183100 Sobic006G006700--Sobic010G183100 Sobic009G254600 Sobic009G254600 Sobic006G006700--Sobic009G254600 Sobic006G006700--Sobic005G065500 Sobic010G038500 Sobic010G038500 Sobic006G006700--Sobic010G038500 Sobic006G006700--Sobic001G189100 Sobic006G006700--Sobic003G237600 Sobic002G195200--Sobic002G195100 Sobic002G195200--Sobic004G245300 Sobic002G195200--Sobic007G214300 Sobic002G195300 Sobic002G195300 Sobic002G195200--Sobic002G195300 Sobic007G058800 Sobic007G058800 Sobic002G195200--Sobic007G058800 Sobic002G195200--Sobic002G023000 Sobic002G195200--Sobic005G065500 Sobic004G094600 Sobic004G094600 Sobic002G195200--Sobic004G094600 Sobic007G215700 Sobic007G215700 Sobic002G195200--Sobic007G215700 Sobic004G245300--Sobic005G065500 Sobic004G245300--Sobic009G254600 Sobic004G245300--Sobic002G195200 Sobic004G245300--Sobic002G195100 Sobic004G223500 Sobic004G223500 Sobic004G245300--Sobic004G223500 Sobic004G018900 Sobic004G018900 Sobic004G245300--Sobic004G018900 Sobic004G245300--Sobic007G214300 Sobic004G245300--Sobic002G195300 Sobic004G245300--Sobic010G038500 Sobic005G065500--Sobic004G245300 Sobic005G217900 Sobic005G217900 Sobic005G065500--Sobic005G217900 Sobic010G157000 Sobic010G157000 Sobic005G065500--Sobic010G157000 Sobic005G167500 Sobic005G167500 Sobic005G065500--Sobic005G167500 Sobic003G058001 Sobic003G058001 Sobic005G065500--Sobic003G058001 Sobic005G065500--Sobic002G195300 Sobic005G065500--Sobic010G038500 Sobic005G065500--Sobic006G006700 Sobic005G065500--Sobic004G223500 Sobic002G023000--Sobic007G058800 Sobic007G059100 Sobic007G059100 Sobic002G023000--Sobic007G059100 Sobic002G023000--Sobic002G195100 Sobic002G023000--Sobic002G195200 Sobic002G023000--Sobic007G214300 Sobic002G023000--Sobic007G215700 Sobic007G058900 Sobic007G058900 Sobic002G023000--Sobic007G058900 Sobic004G258300 Sobic004G258300 Sobic002G023000--Sobic004G258300 Sobic002G327700 Sobic002G327700 Sobic002G023000--Sobic002G327700 Sobic003G237600--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G237600--Sobic001G355600 Sobic003G036100 Sobic003G036100 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200 Sobic007G214300--Sobic002G195200 Sobic007G214300--Sobic004G245300 Sobic007G214300--Sobic005G065500 Sobic007G214300--Sobic006G006700 Sobic007G214300--Sobic002G195100 Sobic007G214300--Sobic004G223500 Sobic007G214300--Sobic002G195300 Sobic007G214300--Sobic003G231800 Sobic007G004850 Sobic007G004850 Sobic007G214300--Sobic007G004850
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.