Gene annotation
Transcriptome id Sobic.007G226200.1,Sobic.007G226200.2
Synonym
Functional annotation -
UniProt A0A1B6PJ85
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@POT family protein, expressed -
2 Sobic.002G195100 - -
3 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
4 Sobic.001G098600 expressed protein -
5 Sobic.006G006700 - -
6 Sobic.002G213000 - -
7 Sobic.010G157000 - -
8 Sobic.003G237600 expressed protein -
9 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
10 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
11 Sobic.002G195300 - -
12 Sobic.004G245300 - -
13 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.004G223500 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
17 Sobic.001G355600 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.004G035700 - -
19 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
20 Sobic.001G361700 expressed protein -


Gene co-expression network
sample Sobic007G226200 Sobic007G226200 Sobic003G371100 Sobic003G371100 Sobic007G226200--Sobic003G371100 Sobic002G195100 Sobic002G195100 Sobic007G226200--Sobic002G195100 Sobic005G065500 Sobic005G065500 Sobic007G226200--Sobic005G065500 Sobic001G098600 Sobic001G098600 Sobic007G226200--Sobic001G098600 Sobic006G006700 Sobic006G006700 Sobic007G226200--Sobic006G006700 Sobic002G213000 Sobic002G213000 Sobic007G226200--Sobic002G213000 Sobic010G157000 Sobic010G157000 Sobic007G226200--Sobic010G157000 Sobic003G237600 Sobic003G237600 Sobic007G226200--Sobic003G237600 Sobic001G189100 Sobic001G189100 Sobic007G226200--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G371100--Sobic001G355600 Sobic003G371100--Sobic007G226200 Sobic003G371100--Sobic002G213000 Sobic003G371100--Sobic001G189100 Sobic003G371100--Sobic003G237600 Sobic003G326400 Sobic003G326400 Sobic003G371100--Sobic003G326400 Sobic009G222200 Sobic009G222200 Sobic003G371100--Sobic009G222200 Sobic003G344700 Sobic003G344700 Sobic003G371100--Sobic003G344700 Sobic002G195100--Sobic006G006700 Sobic002G195200 Sobic002G195200 Sobic002G195100--Sobic002G195200 Sobic004G245300 Sobic004G245300 Sobic002G195100--Sobic004G245300 Sobic002G195100--Sobic005G065500 Sobic002G023000 Sobic002G023000 Sobic002G195100--Sobic002G023000 Sobic002G195100--Sobic003G237600 Sobic002G195100--Sobic001G189100 Sobic007G214300 Sobic007G214300 Sobic002G195100--Sobic007G214300 Sobic005G065500--Sobic004G245300 Sobic005G217900 Sobic005G217900 Sobic005G065500--Sobic005G217900 Sobic005G065500--Sobic010G157000 Sobic005G167500 Sobic005G167500 Sobic005G065500--Sobic005G167500 Sobic003G058001 Sobic003G058001 Sobic005G065500--Sobic003G058001 Sobic002G195300 Sobic002G195300 Sobic005G065500--Sobic002G195300 Sobic010G038500 Sobic010G038500 Sobic005G065500--Sobic010G038500 Sobic005G065500--Sobic006G006700 Sobic004G223500 Sobic004G223500 Sobic005G065500--Sobic004G223500 Sobic001G098600--Sobic010G038500 Sobic004G035700 Sobic004G035700 Sobic001G098600--Sobic004G035700 Sobic001G344600 Sobic001G344600 Sobic001G098600--Sobic001G344600 Sobic001G098600--Sobic005G065500 Sobic001G098600--Sobic005G217900 Sobic001G068400 Sobic001G068400 Sobic001G098600--Sobic001G068400 Sobic009G254600 Sobic009G254600 Sobic001G098600--Sobic009G254600 Sobic010G183100 Sobic010G183100 Sobic001G098600--Sobic010G183100 Sobic001G361700 Sobic001G361700 Sobic001G098600--Sobic001G361700 Sobic006G006700--Sobic002G195100 Sobic003G231800 Sobic003G231800 Sobic006G006700--Sobic003G231800 Sobic006G006700--Sobic010G183100 Sobic006G006700--Sobic009G254600 Sobic006G006700--Sobic005G065500 Sobic006G006700--Sobic010G038500 Sobic006G006700--Sobic001G189100 Sobic006G006700--Sobic003G237600 Sobic002G213000--Sobic004G035700 Sobic002G213000--Sobic010G183100 Sobic002G213000--Sobic001G068400 Sobic001G297400 Sobic001G297400 Sobic002G213000--Sobic001G297400 Sobic002G213000--Sobic009G254600 Sobic002G213000--Sobic001G189100 Sobic002G213000--Sobic003G237600 Sobic008G081200 Sobic008G081200 Sobic002G213000--Sobic008G081200 Sobic010G157000--Sobic003G058001 Sobic010G157000--Sobic005G065500 Sobic010G157000--Sobic005G167500 Sobic004G210601 Sobic004G210601 Sobic010G157000--Sobic004G210601 Sobic010G157000--Sobic002G195300 Sobic010G157000--Sobic010G038500 Sobic010G157000--Sobic005G217900 Sobic010G100200 Sobic010G100200 Sobic010G157000--Sobic010G100200 Sobic010G157000--Sobic001G098600 Sobic003G237600--Sobic001G189100 Sobic003G237600--Sobic001G355600 Sobic003G036100 Sobic003G036100 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.