Gene annotation
Transcriptome id Sobic.009G244600.2,Sobic.009G244600.1
Synonym RL6, Sb09g029575, ATRL6, RSM3
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6PAA6 , A0A1B6PAD3
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF177
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75250 : RAD-like 6
RAP-DB (Rice) LOC_Os05g50350.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044694
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
2 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
3 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
4 Sobic.006G006700 - -
5 Sobic.003G241900 expressed protein -
6 Sobic.003G237600 expressed protein -
7 Sobic.003G199800 expressed protein -
8 Sobic.001G068400 - -
9 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
10 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
11 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
12 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
13 Sobic.001G520800 expressed protein -
14 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
15 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
16 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.007G034300 expressed protein -
18 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic009G244600 Sobic009G244600 Sobic003G231800 Sobic003G231800 Sobic009G244600--Sobic003G231800 Sobic009G244300 Sobic009G244300 Sobic009G244600--Sobic009G244300 Sobic004G267000 Sobic004G267000 Sobic009G244600--Sobic004G267000 Sobic006G006700 Sobic006G006700 Sobic009G244600--Sobic006G006700 Sobic003G241900 Sobic003G241900 Sobic009G244600--Sobic003G241900 Sobic003G237600 Sobic003G237600 Sobic009G244600--Sobic003G237600 Sobic003G199800 Sobic003G199800 Sobic009G244600--Sobic003G199800 Sobic001G068400 Sobic001G068400 Sobic009G244600--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic009G244600--Sobic001G189100 Sobic003G231800--Sobic009G244300 Sobic003G231800--Sobic009G244600 Sobic003G231800--Sobic004G267000 Sobic010G183100 Sobic010G183100 Sobic003G231800--Sobic010G183100 Sobic007G034300 Sobic007G034300 Sobic003G231800--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic003G231800--Sobic001G520800 Sobic003G231800--Sobic006G006700 Sobic009G254600 Sobic009G254600 Sobic003G231800--Sobic009G254600 Sobic003G235500 Sobic003G235500 Sobic003G231800--Sobic003G235500 Sobic009G244300--Sobic003G231800 Sobic009G244300--Sobic004G267000 Sobic009G244300--Sobic009G244600 Sobic009G244300--Sobic007G034300 Sobic009G244300--Sobic003G241900 Sobic009G244300--Sobic001G520800 Sobic004G305800 Sobic004G305800 Sobic009G244300--Sobic004G305800 Sobic008G104601 Sobic008G104601 Sobic009G244300--Sobic008G104601 Sobic009G244300--Sobic003G199800 Sobic004G267000--Sobic009G244300 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic004G267000--Sobic003G241900 Sobic001G076900 Sobic001G076900 Sobic004G267000--Sobic001G076900 Sobic005G056400 Sobic005G056400 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G267000--Sobic004G305800 Sobic007G004850 Sobic007G004850 Sobic004G267000--Sobic007G004850 Sobic002G195100 Sobic002G195100 Sobic006G006700--Sobic002G195100 Sobic006G006700--Sobic003G231800 Sobic006G006700--Sobic010G183100 Sobic006G006700--Sobic009G254600 Sobic005G065500 Sobic005G065500 Sobic006G006700--Sobic005G065500 Sobic010G038500 Sobic010G038500 Sobic006G006700--Sobic010G038500 Sobic006G006700--Sobic001G189100 Sobic006G006700--Sobic003G237600 Sobic003G241900--Sobic009G244300 Sobic010G153900 Sobic010G153900 Sobic003G241900--Sobic010G153900 Sobic002G421300 Sobic002G421300 Sobic003G241900--Sobic002G421300 Sobic003G241900--Sobic004G267000 Sobic003G241900--Sobic003G231800 Sobic003G241900--Sobic007G034300 Sobic003G241900--Sobic004G305800 Sobic003G241900--Sobic001G076900 Sobic010G201700 Sobic010G201700 Sobic003G241900--Sobic010G201700 Sobic003G237600--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic003G237600--Sobic001G355600 Sobic003G036100 Sobic003G036100 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic003G237600--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic003G237600--Sobic008G106200 Sobic002G040100 Sobic002G040100 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic001G068400--Sobic004G035700 Sobic008G081200 Sobic008G081200 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic010G183032 Sobic010G183032 Sobic001G068400--Sobic010G183032 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic001G189100--Sobic008G106200
Octagon: transcription factors


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