Gene annotation
Transcriptome id Sobic.010G050800.1
Synonym Sb10g004410
Functional annotation OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt C5Z4V0
Pfam PF12695
Panther DB PTHR17630 PTHR17630:SF54
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25770 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g06770.1 : OsPOP11 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a041609
Brachypodium KQK19462
Barley HORVU7Hr1G025990.8 , HORVU7Hr1G025990.9 , HORVU7Hr1G025990.2 , HORVU7Hr1G025990.3 , HORVU7Hr1G025990.1 , HORVU7Hr1G025990.6 , HORVU7Hr1G025990.7 , HORVU7Hr1G025990.4 , HORVU7Hr1G025990.5
Wheat TraesCS7B02G022300 , TraesCS7B02G022300 , TraesCS7A02G123200 , TraesCS7D02G121200 , TraesCS7D02G121200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G083500 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K17872: NDC1, demethylphylloquinone reductase
2 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
3 Sobic.010G262433 - -
4 Sobic.007G100425 - -
5 Sobic.004G216400 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
6 Sobic.001G219300 lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
7 Sobic.010G012800 acyl CoA binding protein, putative, expressed K08762: DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
8 Sobic.001G013500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
9 Sobic.002G431100 OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed K00434: L-ascorbate peroxidase
10 Sobic.003G291500 elongation factor, putative, expressed K03234: elongation factor 2
11 Sobic.010G195701 - -
12 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
13 Sobic.010G044200 GLTP domain containing protein, putative, expressed -
14 Sobic.009G129900 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
15 Sobic.001G021400 elongation factor, putative, expressed K03234: elongation factor 2
16 Sobic.008G118900 OsAPRL6 adenosine 5\'-phosphosulfate reductase-like OsAPRL6, expressed -
17 Sobic.003G261500 lipase, putative, expressed -
18 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1
19 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
20 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase


Gene co-expression network
sample Sobic010G050800 Sobic010G050800 Sobic010G083500 Sobic010G083500 Sobic010G050800--Sobic010G083500 Sobic006G271500 Sobic006G271500 Sobic010G050800--Sobic006G271500 Sobic010G262433 Sobic010G262433 Sobic010G050800--Sobic010G262433 Sobic007G100425 Sobic007G100425 Sobic010G050800--Sobic007G100425 Sobic004G216400 Sobic004G216400 Sobic010G050800--Sobic004G216400 Sobic001G219300 Sobic001G219300 Sobic010G050800--Sobic001G219300 Sobic010G012800 Sobic010G012800 Sobic010G050800--Sobic010G012800 Sobic001G013500 Sobic001G013500 Sobic010G050800--Sobic001G013500 Sobic002G431100 Sobic002G431100 Sobic010G050800--Sobic002G431100 Sobic010G165500 Sobic010G165500 Sobic010G083500--Sobic010G165500 Sobic006G123300 Sobic006G123300 Sobic010G083500--Sobic006G123300 Sobic010G083500--Sobic010G050800 Sobic010G232100 Sobic010G232100 Sobic010G083500--Sobic010G232100 Sobic007G088000 Sobic007G088000 Sobic010G083500--Sobic007G088000 Sobic010G277800 Sobic010G277800 Sobic010G083500--Sobic010G277800 Sobic004G272700 Sobic004G272700 Sobic010G083500--Sobic004G272700 Sobic009G185800 Sobic009G185800 Sobic010G083500--Sobic009G185800 Sobic001G357300 Sobic001G357300 Sobic010G083500--Sobic001G357300 Sobic002G230600 Sobic002G230600 Sobic006G271500--Sobic002G230600 Sobic002G128900 Sobic002G128900 Sobic006G271500--Sobic002G128900 Sobic004G238100 Sobic004G238100 Sobic006G271500--Sobic004G238100 Sobic009G155300 Sobic009G155300 Sobic006G271500--Sobic009G155300 Sobic004G121300 Sobic004G121300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic010G262433--Sobic004G216400 Sobic001G468600 Sobic001G468600 Sobic010G262433--Sobic001G468600 Sobic002G071000 Sobic002G071000 Sobic010G262433--Sobic002G071000 Sobic001G021400 Sobic001G021400 Sobic010G262433--Sobic001G021400 Sobic009G257600 Sobic009G257600 Sobic010G262433--Sobic009G257600 Sobic006G002201 Sobic006G002201 Sobic010G262433--Sobic006G002201 Sobic004G310500 Sobic004G310500 Sobic010G262433--Sobic004G310500 Sobic002G332900 Sobic002G332900 Sobic010G262433--Sobic002G332900 Sobic010G262433--Sobic001G219300 Sobic004G216800 Sobic004G216800 Sobic007G100425--Sobic004G216800 Sobic004G224900 Sobic004G224900 Sobic007G100425--Sobic004G224900 Sobic008G132400 Sobic008G132400 Sobic007G100425--Sobic008G132400 Sobic001G074300 Sobic001G074300 Sobic007G100425--Sobic001G074300 Sobic001G048832 Sobic001G048832 Sobic007G100425--Sobic001G048832 Sobic001G005900 Sobic001G005900 Sobic007G100425--Sobic001G005900 Sobic004G138800 Sobic004G138800 Sobic007G100425--Sobic004G138800 Sobic003G063300 Sobic003G063300 Sobic007G100425--Sobic003G063300 Sobic002G364500 Sobic002G364500 Sobic007G100425--Sobic002G364500 Sobic004G216400--Sobic010G262433 Sobic004G216400--Sobic001G468600 Sobic002G341800 Sobic002G341800 Sobic004G216400--Sobic002G341800 Sobic001G283200 Sobic001G283200 Sobic004G216400--Sobic001G283200 Sobic004G216400--Sobic004G310500 Sobic001G021300 Sobic001G021300 Sobic004G216400--Sobic001G021300 Sobic009G190300 Sobic009G190300 Sobic004G216400--Sobic009G190300 Sobic004G216400--Sobic002G071000 Sobic001G082100 Sobic001G082100 Sobic004G216400--Sobic001G082100 Sobic002G111200 Sobic002G111200 Sobic001G219300--Sobic002G111200 Sobic004G080100 Sobic004G080100 Sobic001G219300--Sobic004G080100 Sobic003G055700 Sobic003G055700 Sobic001G219300--Sobic003G055700 Sobic010G049100 Sobic010G049100 Sobic001G219300--Sobic010G049100 Sobic001G219300--Sobic009G257600 Sobic001G014800 Sobic001G014800 Sobic001G219300--Sobic001G014800 Sobic009G005900 Sobic009G005900 Sobic001G219300--Sobic009G005900 Sobic006G244700 Sobic006G244700 Sobic001G219300--Sobic006G244700 Sobic008G032600 Sobic008G032600 Sobic001G219300--Sobic008G032600 Sobic010G195701 Sobic010G195701 Sobic010G012800--Sobic010G195701 Sobic010G279200 Sobic010G279200 Sobic010G012800--Sobic010G279200 Sobic010G012800--Sobic001G219300 Sobic001G428200 Sobic001G428200 Sobic010G012800--Sobic001G428200 Sobic001G388600 Sobic001G388600 Sobic010G012800--Sobic001G388600 Sobic002G363100 Sobic002G363100 Sobic010G012800--Sobic002G363100 Sobic010G044200 Sobic010G044200 Sobic010G012800--Sobic010G044200 Sobic010G012800--Sobic006G244700 Sobic003G325500 Sobic003G325500 Sobic010G012800--Sobic003G325500 Sobic001G106700 Sobic001G106700 Sobic001G013500--Sobic001G106700 Sobic001G013500--Sobic009G257600 Sobic001G460600 Sobic001G460600 Sobic001G013500--Sobic001G460600 Sobic002G166900 Sobic002G166900 Sobic001G013500--Sobic002G166900 Sobic004G067100 Sobic004G067100 Sobic001G013500--Sobic004G067100 Sobic001G013500--Sobic001G219300 Sobic009G225000 Sobic009G225000 Sobic001G013500--Sobic009G225000 Sobic001G461900 Sobic001G461900 Sobic001G013500--Sobic001G461900 Sobic001G013500--Sobic010G277800 Sobic005G194900 Sobic005G194900 Sobic002G431100--Sobic005G194900 Sobic006G276700 Sobic006G276700 Sobic002G431100--Sobic006G276700 Sobic004G162000 Sobic004G162000 Sobic002G431100--Sobic004G162000 Sobic001G031900 Sobic001G031900 Sobic002G431100--Sobic001G031900 Sobic004G282700 Sobic004G282700 Sobic002G431100--Sobic004G282700 Sobic003G336000 Sobic003G336000 Sobic002G431100--Sobic003G336000 Sobic010G185200 Sobic010G185200 Sobic002G431100--Sobic010G185200 Sobic006G058900 Sobic006G058900 Sobic002G431100--Sobic006G058900 Sobic004G297700 Sobic004G297700 Sobic002G431100--Sobic004G297700
Octagon: transcription factors


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