Gene annotation
Transcriptome id Sobic.007G052700.1
Synonym Sb07g004260, ACBP, ACBP6
Functional annotation acyl CoA binding protein, putative, expressed
UniProt C5YHF4
Pfam PF00887
Panther DB PTHR23310 PTHR23310:SF67
NCBI CDD -
KEGG Orthology K08762; DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
Gene Ontology GO:0000062; fatty-acyl-CoA binding


Orthologs (automatic annotation)
TAIR AT1G31812 : acyl-CoA-binding protein 6
RAP-DB (Rice) LOC_Os08g06550.1 : acyl CoA binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95273
Barley -
Wheat TraesCS7D02G292900 , TraesCS7B02G189600
Populus PNT44802


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cDNA sequences
Sobic.007G052700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G236300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@shikimate kinase, putative, expressed K00891: aroK, shikimate kinase
2 Sobic.001G139001 - -
3 Sobic.006G100600 histone H3, putative, expressed K11253: histone H3
4 Sobic.006G025900 - -
5 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
6 Sobic.001G131400 thioesterase family protein, putative, expressed -
7 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
9 Sobic.007G147800 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
11 Sobic.001G290700 AGAP003819-PA, putative, expressed K09008: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
12 Sobic.003G341600 prenylated rab acceptor, putative, expressed -
13 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G367800 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
15 Sobic.004G162000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
16 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
17 Sobic.002G226300 OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
18 Sobic.003G157300 GATA zinc finger domain containing protein, expressed -
19 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
20 Sobic.010G074600 expressed protein -


Gene co-expression network
sample Sobic007G052700 Sobic007G052700 Sobic004G236300 Sobic004G236300 Sobic007G052700--Sobic004G236300 Sobic001G139001 Sobic001G139001 Sobic007G052700--Sobic001G139001 Sobic006G100600 Sobic006G100600 Sobic007G052700--Sobic006G100600 Sobic006G025900 Sobic006G025900 Sobic007G052700--Sobic006G025900 Sobic009G017800 Sobic009G017800 Sobic007G052700--Sobic009G017800 Sobic001G131400 Sobic001G131400 Sobic007G052700--Sobic001G131400 Sobic001G012500 Sobic001G012500 Sobic007G052700--Sobic001G012500 Sobic001G388600 Sobic001G388600 Sobic007G052700--Sobic001G388600 Sobic007G147800 Sobic007G147800 Sobic007G052700--Sobic007G147800 Sobic004G236300--Sobic006G100600 Sobic004G130100 Sobic004G130100 Sobic004G236300--Sobic004G130100 Sobic002G255200 Sobic002G255200 Sobic004G236300--Sobic002G255200 Sobic002G355300 Sobic002G355300 Sobic004G236300--Sobic002G355300 Sobic003G337000 Sobic003G337000 Sobic004G236300--Sobic003G337000 Sobic006G232200 Sobic006G232200 Sobic004G236300--Sobic006G232200 Sobic004G055200 Sobic004G055200 Sobic004G236300--Sobic004G055200 Sobic004G136600 Sobic004G136600 Sobic004G236300--Sobic004G136600 Sobic004G236300--Sobic001G388600 Sobic002G331300 Sobic002G331300 Sobic001G139001--Sobic002G331300 Sobic003G073900 Sobic003G073900 Sobic001G139001--Sobic003G073900 Sobic009G224700 Sobic009G224700 Sobic001G139001--Sobic009G224700 Sobic001G139001--Sobic001G388600 Sobic002G308300 Sobic002G308300 Sobic001G139001--Sobic002G308300 Sobic009G258600 Sobic009G258600 Sobic001G139001--Sobic009G258600 Sobic001G478000 Sobic001G478000 Sobic001G139001--Sobic001G478000 Sobic001G139001--Sobic006G100600 Sobic009G101700 Sobic009G101700 Sobic001G139001--Sobic009G101700 Sobic008G073300 Sobic008G073300 Sobic006G100600--Sobic008G073300 Sobic006G100600--Sobic004G236300 Sobic006G100600--Sobic004G130100 Sobic002G371100 Sobic002G371100 Sobic006G100600--Sobic002G371100 Sobic003G440800 Sobic003G440800 Sobic006G100600--Sobic003G440800 Sobic006G100600--Sobic002G255200 Sobic001G128400 Sobic001G128400 Sobic006G100600--Sobic001G128400 Sobic003G386100 Sobic003G386100 Sobic006G100600--Sobic003G386100 Sobic006G100600--Sobic006G232200 Sobic009G038100 Sobic009G038100 Sobic006G025900--Sobic009G038100 Sobic001G189300 Sobic001G189300 Sobic006G025900--Sobic001G189300 Sobic009G121900 Sobic009G121900 Sobic006G025900--Sobic009G121900 Sobic001G052000 Sobic001G052000 Sobic006G025900--Sobic001G052000 Sobic006G026000 Sobic006G026000 Sobic006G025900--Sobic006G026000 Sobic001G032000 Sobic001G032000 Sobic006G025900--Sobic001G032000 Sobic003G341600 Sobic003G341600 Sobic006G025900--Sobic003G341600 Sobic001G280800 Sobic001G280800 Sobic006G025900--Sobic001G280800 Sobic008G036800 Sobic008G036800 Sobic006G025900--Sobic008G036800 Sobic009G015700 Sobic009G015700 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic001G447600 Sobic001G447600 Sobic009G017800--Sobic001G447600 Sobic006G097200 Sobic006G097200 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic010G026925 Sobic010G026925 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic001G131400--Sobic010G135000 Sobic001G012400 Sobic001G012400 Sobic001G012500--Sobic001G012400 Sobic002G347300 Sobic002G347300 Sobic001G012500--Sobic002G347300 Sobic001G012600 Sobic001G012600 Sobic001G012500--Sobic001G012600 Sobic002G338400 Sobic002G338400 Sobic001G012500--Sobic002G338400 Sobic001G035600 Sobic001G035600 Sobic001G012500--Sobic001G035600 Sobic001G012200 Sobic001G012200 Sobic001G012500--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic001G012500--Sobic001G012300 Sobic003G340800 Sobic003G340800 Sobic001G012500--Sobic003G340800 Sobic009G232200 Sobic009G232200 Sobic001G012500--Sobic009G232200 Sobic001G388600--Sobic001G478000 Sobic001G388600--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic001G388600--Sobic004G327300 Sobic002G363100 Sobic002G363100 Sobic001G388600--Sobic002G363100 Sobic001G388600--Sobic002G371100 Sobic001G005900 Sobic001G005900 Sobic001G388600--Sobic001G005900 Sobic004G099900 Sobic004G099900 Sobic001G388600--Sobic004G099900 Sobic007G152400 Sobic007G152400 Sobic001G388600--Sobic007G152400 Sobic003G216500 Sobic003G216500 Sobic001G388600--Sobic003G216500 Sobic007G090436 Sobic007G090436 Sobic007G147800--Sobic007G090436 Sobic010G106700 Sobic010G106700 Sobic007G147800--Sobic010G106700 Sobic001G046800 Sobic001G046800 Sobic007G147800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic007G147800--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic007G147800--Sobic009G008800 Sobic003G206700 Sobic003G206700 Sobic007G147800--Sobic003G206700 Sobic002G053900 Sobic002G053900 Sobic007G147800--Sobic002G053900 Sobic001G144800 Sobic001G144800 Sobic007G147800--Sobic001G144800 Sobic005G194900 Sobic005G194900 Sobic007G147800--Sobic005G194900
Octagon: transcription factors


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