Gene annotation
Transcriptome id Sobic.001G139001.1
Synonym -
Functional annotation -
UniProt A0A1Z5S633
Pfam -
Panther DB PTHR36815 PTHR36815:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65880 : -
RAP-DB (Rice) LOC_Os03g47240.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G331300 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
2 Sobic.003G073900 expressed protein -
3 Sobic.009G224700 anti-silencing protein, ASF1-like domain containing protein, expressed K10753: histone chaperone ASF1
4 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
5 Sobic.002G308300 expressed protein -
6 Sobic.009G258600 LSM domain containing protein, expressed K12627: U6 snRNA-associated Sm-like protein LSm8
7 Sobic.001G478000 CutA, chloroplast precursor, putative, expressed K03926: periplasmic divalent cation tolerance protein
8 Sobic.006G100600 histone H3, putative, expressed K11253: histone H3
9 Sobic.009G101700 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
10 Sobic.001G039400 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
11 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
12 Sobic.003G254300 peroxiredoxin, putative, expressed -
13 Sobic.001G225700 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
14 Sobic.001G347901 - -
15 Sobic.009G227400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
16 Sobic.001G131400 thioesterase family protein, putative, expressed -
17 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
18 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
19 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
20 Sobic.009G120100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I


Gene co-expression network
sample Sobic001G139001 Sobic001G139001 Sobic002G331300 Sobic002G331300 Sobic001G139001--Sobic002G331300 Sobic003G073900 Sobic003G073900 Sobic001G139001--Sobic003G073900 Sobic009G224700 Sobic009G224700 Sobic001G139001--Sobic009G224700 Sobic001G388600 Sobic001G388600 Sobic001G139001--Sobic001G388600 Sobic002G308300 Sobic002G308300 Sobic001G139001--Sobic002G308300 Sobic009G258600 Sobic009G258600 Sobic001G139001--Sobic009G258600 Sobic001G478000 Sobic001G478000 Sobic001G139001--Sobic001G478000 Sobic006G100600 Sobic006G100600 Sobic001G139001--Sobic006G100600 Sobic009G101700 Sobic009G101700 Sobic001G139001--Sobic009G101700 Sobic006G115000 Sobic006G115000 Sobic002G331300--Sobic006G115000 Sobic005G050500 Sobic005G050500 Sobic002G331300--Sobic005G050500 Sobic003G129800 Sobic003G129800 Sobic002G331300--Sobic003G129800 Sobic009G179100 Sobic009G179100 Sobic002G331300--Sobic009G179100 Sobic004G342400 Sobic004G342400 Sobic002G331300--Sobic004G342400 Sobic001G334300 Sobic001G334300 Sobic002G331300--Sobic001G334300 Sobic009G233400 Sobic009G233400 Sobic002G331300--Sobic009G233400 Sobic009G227400 Sobic009G227400 Sobic002G331300--Sobic009G227400 Sobic010G023900 Sobic010G023900 Sobic002G331300--Sobic010G023900 Sobic003G073900--Sobic006G115000 Sobic003G018600 Sobic003G018600 Sobic003G073900--Sobic003G018600 Sobic010G054200 Sobic010G054200 Sobic003G073900--Sobic010G054200 Sobic002G286900 Sobic002G286900 Sobic003G073900--Sobic002G286900 Sobic005G110800 Sobic005G110800 Sobic003G073900--Sobic005G110800 Sobic003G150000 Sobic003G150000 Sobic003G073900--Sobic003G150000 Sobic001G226500 Sobic001G226500 Sobic003G073900--Sobic001G226500 Sobic003G249700 Sobic003G249700 Sobic003G073900--Sobic003G249700 Sobic001G225700 Sobic001G225700 Sobic003G073900--Sobic001G225700 Sobic001G286300 Sobic001G286300 Sobic009G224700--Sobic001G286300 Sobic009G120100 Sobic009G120100 Sobic009G224700--Sobic009G120100 Sobic002G222900 Sobic002G222900 Sobic009G224700--Sobic002G222900 Sobic009G224700--Sobic002G308300 Sobic001G347901 Sobic001G347901 Sobic009G224700--Sobic001G347901 Sobic009G016500 Sobic009G016500 Sobic009G224700--Sobic009G016500 Sobic002G309700 Sobic002G309700 Sobic009G224700--Sobic002G309700 Sobic009G224700--Sobic002G331300 Sobic001G128400 Sobic001G128400 Sobic009G224700--Sobic001G128400 Sobic001G388600--Sobic001G478000 Sobic004G130100 Sobic004G130100 Sobic001G388600--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic001G388600--Sobic004G327300 Sobic002G363100 Sobic002G363100 Sobic001G388600--Sobic002G363100 Sobic002G371100 Sobic002G371100 Sobic001G388600--Sobic002G371100 Sobic001G005900 Sobic001G005900 Sobic001G388600--Sobic001G005900 Sobic004G099900 Sobic004G099900 Sobic001G388600--Sobic004G099900 Sobic007G152400 Sobic007G152400 Sobic001G388600--Sobic007G152400 Sobic003G216500 Sobic003G216500 Sobic001G388600--Sobic003G216500 Sobic001G286200 Sobic001G286200 Sobic002G308300--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic002G308300--Sobic010G264300 Sobic002G308300--Sobic001G347901 Sobic002G308300--Sobic009G016500 Sobic002G308300--Sobic002G309700 Sobic001G282500 Sobic001G282500 Sobic002G308300--Sobic001G282500 Sobic001G370700 Sobic001G370700 Sobic002G308300--Sobic001G370700 Sobic002G180300 Sobic002G180300 Sobic002G308300--Sobic002G180300 Sobic002G078300 Sobic002G078300 Sobic002G308300--Sobic002G078300 Sobic003G127700 Sobic003G127700 Sobic009G258600--Sobic003G127700 Sobic010G210000 Sobic010G210000 Sobic009G258600--Sobic010G210000 Sobic003G367900 Sobic003G367900 Sobic009G258600--Sobic003G367900 Sobic003G028100 Sobic003G028100 Sobic009G258600--Sobic003G028100 Sobic009G012700 Sobic009G012700 Sobic009G258600--Sobic009G012700 Sobic004G137900 Sobic004G137900 Sobic009G258600--Sobic004G137900 Sobic009G258600--Sobic002G331300 Sobic001G096100 Sobic001G096100 Sobic009G258600--Sobic001G096100 Sobic003G190800 Sobic003G190800 Sobic009G258600--Sobic003G190800 Sobic009G240900 Sobic009G240900 Sobic001G478000--Sobic009G240900 Sobic009G144300 Sobic009G144300 Sobic001G478000--Sobic009G144300 Sobic001G478000--Sobic001G388600 Sobic007G076300 Sobic007G076300 Sobic001G478000--Sobic007G076300 Sobic002G255100 Sobic002G255100 Sobic001G478000--Sobic002G255100 Sobic004G138800 Sobic004G138800 Sobic001G478000--Sobic004G138800 Sobic004G216800 Sobic004G216800 Sobic001G478000--Sobic004G216800 Sobic001G478000--Sobic001G096100 Sobic001G478000--Sobic009G227400 Sobic008G073300 Sobic008G073300 Sobic006G100600--Sobic008G073300 Sobic004G236300 Sobic004G236300 Sobic006G100600--Sobic004G236300 Sobic006G100600--Sobic004G130100 Sobic006G100600--Sobic002G371100 Sobic003G440800 Sobic003G440800 Sobic006G100600--Sobic003G440800 Sobic002G255200 Sobic002G255200 Sobic006G100600--Sobic002G255200 Sobic006G100600--Sobic001G128400 Sobic003G386100 Sobic003G386100 Sobic006G100600--Sobic003G386100 Sobic006G232200 Sobic006G232200 Sobic006G100600--Sobic006G232200 Sobic009G101700--Sobic009G179100 Sobic009G101700--Sobic005G050500 Sobic009G101700--Sobic001G334300 Sobic003G387900 Sobic003G387900 Sobic009G101700--Sobic003G387900 Sobic009G101700--Sobic004G342400 Sobic006G213000 Sobic006G213000 Sobic009G101700--Sobic006G213000 Sobic009G101700--Sobic001G226500 Sobic009G242400 Sobic009G242400 Sobic009G101700--Sobic009G242400 Sobic002G379500 Sobic002G379500 Sobic009G101700--Sobic002G379500
Octagon: transcription factors


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