Gene annotation
Transcriptome id Sobic.009G155300.1
Synonym Sb09g021870
Functional annotation solute carrier family 35 member F2, putative, expressed
UniProt C5YYT2
Pfam PF00892
Panther DB PTHR14233 PTHR14233:SF13
NCBI CDD KOG2766; Predicted membrane protein
KEGG Orthology K15287; solute carrier family 35, member F1/2
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G59340 : Eukaryotic protein of unknown function (DUF914)
RAP-DB (Rice) LOC_Os05g37200.1 : solute carrier family 35 member F2, putative, expressed
MaizeGDB (Corn) Zm00025a043817
Brachypodium KQK05999 , KQK06001
Barley HORVU1Hr1G073720.5 , HORVU1Hr1G073720.6 , HORVU1Hr1G073720.7 , HORVU1Hr1G073720.1 , HORVU1Hr1G073720.2 , HORVU1Hr1G073720.3 , HORVU1Hr1G073720.9 , HORVU1Hr1G073720.17 , HORVU1Hr1G073720.12 , HORVU1Hr1G073720.13 , HORVU1Hr1G073720.10 , HORVU1Hr1G073720.11 , HORVU1Hr1G073720.14 , HORVU1Hr1G073720.29 , HORVU1Hr1G073720.28 , HORVU1Hr1G073720.27 , HORVU1Hr1G073720.26 , HORVU1Hr1G073720.25 , HORVU1Hr1G073720.24 , HORVU1Hr1G073720.23 , HORVU1Hr1G073720.22 , HORVU1Hr1G073720.19
Wheat TraesCS1B02G286200 , TraesCS1A02G277000 , TraesCS1A02G277000 , TraesCS1D02G276500 , TraesCS1D02G276500 , TraesCS1D02G276500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
2 Sobic.002G128900 thioesterase family protein, putative, expressed -
3 Sobic.009G207300 ubiquitin domain-containing protein 1, putative, expressed -
4 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
5 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
6 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
7 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
8 Sobic.001G048200 elongation factor P, putative, expressed -
9 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
10 Sobic.009G190600 oryzain alpha chain precursor, putative, expressed -
11 Sobic.008G131100 xaa-Pro aminopeptidase, putative, expressed K01262: Xaa-Pro aminopeptidase
12 Sobic.008G058100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator Sir2 family protein, putative, expressed K11414: SIRT4, NAD+-dependent protein deacetylase sirtuin 4
13 Sobic.008G133700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
15 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
16 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
17 Sobic.004G275000 heat shock protein DnaJ, putative, expressed -
18 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
19 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
20 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase


Gene co-expression network
sample Sobic009G155300 Sobic009G155300 Sobic006G271500 Sobic006G271500 Sobic009G155300--Sobic006G271500 Sobic002G128900 Sobic002G128900 Sobic009G155300--Sobic002G128900 Sobic009G207300 Sobic009G207300 Sobic009G155300--Sobic009G207300 Sobic004G113100 Sobic004G113100 Sobic009G155300--Sobic004G113100 Sobic010G049100 Sobic010G049100 Sobic009G155300--Sobic010G049100 Sobic004G121300 Sobic004G121300 Sobic009G155300--Sobic004G121300 Sobic002G230600 Sobic002G230600 Sobic009G155300--Sobic002G230600 Sobic001G048200 Sobic001G048200 Sobic009G155300--Sobic001G048200 Sobic002G279700 Sobic002G279700 Sobic009G155300--Sobic002G279700 Sobic006G271500--Sobic002G230600 Sobic006G271500--Sobic002G128900 Sobic004G238100 Sobic004G238100 Sobic006G271500--Sobic004G238100 Sobic006G271500--Sobic009G155300 Sobic006G271500--Sobic004G121300 Sobic001G261545 Sobic001G261545 Sobic006G271500--Sobic001G261545 Sobic010G050800 Sobic010G050800 Sobic006G271500--Sobic010G050800 Sobic001G085600 Sobic001G085600 Sobic006G271500--Sobic001G085600 Sobic008G037800 Sobic008G037800 Sobic006G271500--Sobic008G037800 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic008G089900 Sobic008G089900 Sobic009G207300--Sobic008G089900 Sobic009G207300--Sobic002G128900 Sobic005G062700 Sobic005G062700 Sobic009G207300--Sobic005G062700 Sobic007G079400 Sobic007G079400 Sobic009G207300--Sobic007G079400 Sobic009G162600 Sobic009G162600 Sobic009G207300--Sobic009G162600 Sobic008G187100 Sobic008G187100 Sobic009G207300--Sobic008G187100 Sobic001G303200 Sobic001G303200 Sobic009G207300--Sobic001G303200 Sobic003G373600 Sobic003G373600 Sobic009G207300--Sobic003G373600 Sobic004G070700 Sobic004G070700 Sobic009G207300--Sobic004G070700 Sobic003G103300 Sobic003G103300 Sobic004G113100--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic004G113100--Sobic004G125800 Sobic001G015200 Sobic001G015200 Sobic004G113100--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic004G113100--Sobic007G046950 Sobic010G101000 Sobic010G101000 Sobic004G113100--Sobic010G101000 Sobic009G225600 Sobic009G225600 Sobic004G113100--Sobic009G225600 Sobic004G113100--Sobic005G062700 Sobic002G030900 Sobic002G030900 Sobic004G113100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic004G113100--Sobic001G104700 Sobic004G080100 Sobic004G080100 Sobic010G049100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic010G049100--Sobic003G246700 Sobic001G014800 Sobic001G014800 Sobic010G049100--Sobic001G014800 Sobic008G032600 Sobic008G032600 Sobic010G049100--Sobic008G032600 Sobic010G049100--Sobic004G121300 Sobic002G226900 Sobic002G226900 Sobic010G049100--Sobic002G226900 Sobic004G296400 Sobic004G296400 Sobic010G049100--Sobic004G296400 Sobic009G139900 Sobic009G139900 Sobic010G049100--Sobic009G139900 Sobic004G136300 Sobic004G136300 Sobic010G049100--Sobic004G136300 Sobic004G121300--Sobic001G014800 Sobic004G121300--Sobic010G049100 Sobic001G333100 Sobic001G333100 Sobic004G121300--Sobic001G333100 Sobic001G434200 Sobic001G434200 Sobic004G121300--Sobic001G434200 Sobic008G033500 Sobic008G033500 Sobic004G121300--Sobic008G033500 Sobic002G131500 Sobic002G131500 Sobic004G121300--Sobic002G131500 Sobic006G274800 Sobic006G274800 Sobic004G121300--Sobic006G274800 Sobic005G111900 Sobic005G111900 Sobic004G121300--Sobic005G111900 Sobic010G131900 Sobic010G131900 Sobic004G121300--Sobic010G131900 Sobic010G062500 Sobic010G062500 Sobic002G230600--Sobic010G062500 Sobic002G230600--Sobic004G113100 Sobic002G230600--Sobic008G037800 Sobic001G167900 Sobic001G167900 Sobic002G230600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic002G230600--Sobic004G124400 Sobic004G154800 Sobic004G154800 Sobic002G230600--Sobic004G154800 Sobic006G265900 Sobic006G265900 Sobic002G230600--Sobic006G265900 Sobic002G351600 Sobic002G351600 Sobic002G230600--Sobic002G351600 Sobic004G305900 Sobic004G305900 Sobic002G230600--Sobic004G305900 Sobic006G244700 Sobic006G244700 Sobic001G048200--Sobic006G244700 Sobic003G055700 Sobic003G055700 Sobic001G048200--Sobic003G055700 Sobic002G116900 Sobic002G116900 Sobic001G048200--Sobic002G116900 Sobic001G048200--Sobic010G049100 Sobic001G048200--Sobic008G032600 Sobic001G048200--Sobic004G080100 Sobic004G040900 Sobic004G040900 Sobic001G048200--Sobic004G040900 Sobic007G188300 Sobic007G188300 Sobic001G048200--Sobic007G188300 Sobic001G468600 Sobic001G468600 Sobic001G048200--Sobic001G468600 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic002G279700--Sobic001G295300 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic001G020100 Sobic001G020100 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400
Octagon: transcription factors


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