Gene annotation
Transcriptome id Sobic.008G110300.1
Synonym Sb08g016460
Functional annotation OsFBX448 - F-box domain containing protein, expressed
UniProt A0A1B6PCY1
Pfam -
Panther DB PTHR22844 PTHR22844:SF184
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12350 : F-box family protein
RAP-DB (Rice) LOC_Os12g32630.1 : OsFBX448 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040649
Brachypodium KQJ86587
Barley -
Wheat TraesCS5B02G107300 , TraesCS5A02G103000
Populus -


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cDNA sequences
Sobic.008G110300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
3 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
4 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
5 Sobic.010G230500 expressed protein -
6 Sobic.010G077100 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
7 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
8 Sobic.009G258100 early-responsive to dehydration protein-related, putative, expressed -
9 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
10 Sobic.003G425300 Phycoerythrobilin ferredoxin oxidoreductase(PubMedID : 24906815)@phycoerythrobilin ferredoxin oxidoreductase, putative, expressed K08101: phytochromobilin:ferredoxin oxidoreductase
11 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
12 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
13 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
14 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
15 Sobic.010G074300 smr domain containing protein, expressed -
16 Sobic.003G157900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed -
17 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
18 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G129800 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
20 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic008G110300 Sobic008G110300 Sobic004G189200 Sobic004G189200 Sobic008G110300--Sobic004G189200 Sobic003G373600 Sobic003G373600 Sobic008G110300--Sobic003G373600 Sobic004G231900 Sobic004G231900 Sobic008G110300--Sobic004G231900 Sobic002G290400 Sobic002G290400 Sobic008G110300--Sobic002G290400 Sobic010G230500 Sobic010G230500 Sobic008G110300--Sobic010G230500 Sobic010G077100 Sobic010G077100 Sobic008G110300--Sobic010G077100 Sobic007G121300 Sobic007G121300 Sobic008G110300--Sobic007G121300 Sobic009G258100 Sobic009G258100 Sobic008G110300--Sobic009G258100 Sobic006G051800 Sobic006G051800 Sobic008G110300--Sobic006G051800 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic004G189200--Sobic001G062300 Sobic004G189200--Sobic006G051800 Sobic008G167600 Sobic008G167600 Sobic004G189200--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic004G189200--Sobic007G190000 Sobic004G189200--Sobic004G231900 Sobic003G301500 Sobic003G301500 Sobic004G189200--Sobic003G301500 Sobic002G383600 Sobic002G383600 Sobic004G189200--Sobic002G383600 Sobic004G179300 Sobic004G179300 Sobic004G189200--Sobic004G179300 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G381700 Sobic003G381700 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic008G187100 Sobic008G187100 Sobic003G373600--Sobic008G187100 Sobic006G219600 Sobic006G219600 Sobic004G231900--Sobic006G219600 Sobic004G231900--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic004G231900--Sobic009G074400 Sobic004G146600 Sobic004G146600 Sobic004G231900--Sobic004G146600 Sobic004G231900--Sobic008G167600 Sobic004G001500 Sobic004G001500 Sobic004G231900--Sobic004G001500 Sobic001G446850 Sobic001G446850 Sobic004G231900--Sobic001G446850 Sobic004G231900--Sobic004G189200 Sobic004G312600 Sobic004G312600 Sobic004G231900--Sobic004G312600 Sobic006G209400 Sobic006G209400 Sobic002G290400--Sobic006G209400 Sobic003G076500 Sobic003G076500 Sobic002G290400--Sobic003G076500 Sobic010G251300 Sobic010G251300 Sobic002G290400--Sobic010G251300 Sobic003G309200 Sobic003G309200 Sobic002G290400--Sobic003G309200 Sobic001G414500 Sobic001G414500 Sobic002G290400--Sobic001G414500 Sobic008G089900 Sobic008G089900 Sobic002G290400--Sobic008G089900 Sobic006G092400 Sobic006G092400 Sobic002G290400--Sobic006G092400 Sobic004G118200 Sobic004G118200 Sobic002G290400--Sobic004G118200 Sobic002G290400--Sobic010G230500 Sobic010G074300 Sobic010G074300 Sobic010G230500--Sobic010G074300 Sobic003G295900 Sobic003G295900 Sobic010G230500--Sobic003G295900 Sobic010G230500--Sobic004G189200 Sobic010G230500--Sobic008G089900 Sobic004G103000 Sobic004G103000 Sobic010G230500--Sobic004G103000 Sobic002G358800 Sobic002G358800 Sobic010G230500--Sobic002G358800 Sobic010G230500--Sobic008G077500 Sobic007G090900 Sobic007G090900 Sobic010G230500--Sobic007G090900 Sobic010G230500--Sobic002G290400 Sobic010G077100--Sobic002G383600 Sobic001G522100 Sobic001G522100 Sobic010G077100--Sobic001G522100 Sobic010G077100--Sobic008G110300 Sobic001G292000 Sobic001G292000 Sobic010G077100--Sobic001G292000 Sobic004G255700 Sobic004G255700 Sobic010G077100--Sobic004G255700 Sobic007G146400 Sobic007G146400 Sobic010G077100--Sobic007G146400 Sobic010G077100--Sobic004G189200 Sobic008G047400 Sobic008G047400 Sobic010G077100--Sobic008G047400 Sobic001G111800 Sobic001G111800 Sobic010G077100--Sobic001G111800 Sobic004G128900 Sobic004G128900 Sobic007G121300--Sobic004G128900 Sobic002G161400 Sobic002G161400 Sobic007G121300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic007G121300--Sobic004G344600 Sobic001G331600 Sobic001G331600 Sobic007G121300--Sobic001G331600 Sobic003G340300 Sobic003G340300 Sobic007G121300--Sobic003G340300 Sobic009G259100 Sobic009G259100 Sobic007G121300--Sobic009G259100 Sobic006G191500 Sobic006G191500 Sobic007G121300--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic007G121300--Sobic001G485100 Sobic004G035100 Sobic004G035100 Sobic007G121300--Sobic004G035100 Sobic009G258100--Sobic002G358800 Sobic009G258100--Sobic010G230500 Sobic008G077600 Sobic008G077600 Sobic009G258100--Sobic008G077600 Sobic009G258100--Sobic003G425300 Sobic009G258100--Sobic003G373600 Sobic009G129800 Sobic009G129800 Sobic009G258100--Sobic009G129800 Sobic009G258100--Sobic002G290400 Sobic003G350800 Sobic003G350800 Sobic009G258100--Sobic003G350800 Sobic009G180500 Sobic009G180500 Sobic009G258100--Sobic009G180500 Sobic003G029500 Sobic003G029500 Sobic006G051800--Sobic003G029500 Sobic006G051800--Sobic009G074400 Sobic006G051800--Sobic004G231900 Sobic006G051800--Sobic002G383600 Sobic006G051800--Sobic006G219600 Sobic006G051800--Sobic004G189200 Sobic006G051800--Sobic006G257800 Sobic005G201000 Sobic005G201000 Sobic006G051800--Sobic005G201000 Sobic006G051800--Sobic008G167600
Octagon: transcription factors


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