Gene annotation
Transcriptome id Sobic.002G131200.3,Sobic.002G131200.2,Sobic.002G131200.4
Synonym Sb02g011280
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A1W0W3Q7 , A0A1W0W3L5
Pfam PF00149
Panther DB PTHR34211 PTHR34211:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT4G11800 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os07g04210.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a013516 , Zm00025a026860
Brachypodium KQJ91514 , KQJ91515 , KQJ91513
Barley HORVU5Hr1G091410.1 , HORVU5Hr1G091250.12 , HORVU5Hr1G091250.13 , HORVU5Hr1G091250.11 , HORVU5Hr1G091250.16 , HORVU5Hr1G091250.17 , HORVU5Hr1G091250.14 , HORVU5Hr1G091250.15 , HORVU5Hr1G091250.10 , HORVU5Hr1G091250.4 , HORVU5Hr1G091250.5 , HORVU5Hr1G091250.6 , HORVU5Hr1G091250.7 , HORVU5Hr1G091250.1 , HORVU5Hr1G091250.2 , HORVU5Hr1G091250.3 , HORVU5Hr1G091250.8 , HORVU5Hr1G091250.9
Wheat TraesCS5D02G376300 , TraesCS5A02G367000 , TraesCS5B02G369300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G355800 methyltransferase, putative, expressed -
2 Sobic.010G059000 ANTH/ENTH domain containing protein, putative, expressed -
3 Sobic.002G091600 methyltransferase, putative, expressed -
4 Sobic.008G070800 expressed protein -
5 Sobic.002G309900 cupin 2, conserved barrel domain protein, putative, expressed K14977: ylbA, (S)-ureidoglycine aminohydrolase
6 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
7 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
8 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
9 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
10 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
11 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
12 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
13 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
15 Sobic.010G147000 tesmin/TSO1-like CXC domain containing protein, expressed -
16 Sobic.001G303100 expressed protein -
17 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
18 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
19 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
20 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase


Gene co-expression network
sample Sobic002G131200 Sobic002G131200 Sobic001G355800 Sobic001G355800 Sobic002G131200--Sobic001G355800 Sobic010G059000 Sobic010G059000 Sobic002G131200--Sobic010G059000 Sobic002G091600 Sobic002G091600 Sobic002G131200--Sobic002G091600 Sobic008G070800 Sobic008G070800 Sobic002G131200--Sobic008G070800 Sobic002G309900 Sobic002G309900 Sobic002G131200--Sobic002G309900 Sobic002G383800 Sobic002G383800 Sobic002G131200--Sobic002G383800 Sobic003G011300 Sobic003G011300 Sobic002G131200--Sobic003G011300 Sobic010G205100 Sobic010G205100 Sobic002G131200--Sobic010G205100 Sobic002G359400 Sobic002G359400 Sobic002G131200--Sobic002G359400 Sobic001G355800--Sobic002G131200 Sobic001G192000 Sobic001G192000 Sobic001G355800--Sobic001G192000 Sobic001G333100 Sobic001G333100 Sobic001G355800--Sobic001G333100 Sobic009G201300 Sobic009G201300 Sobic001G355800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G355800--Sobic003G354600 Sobic002G305000 Sobic002G305000 Sobic001G355800--Sobic002G305000 Sobic003G311900 Sobic003G311900 Sobic001G355800--Sobic003G311900 Sobic003G119600 Sobic003G119600 Sobic001G355800--Sobic003G119600 Sobic001G355800--Sobic002G091600 Sobic010G059000--Sobic002G131200 Sobic001G221800 Sobic001G221800 Sobic010G059000--Sobic001G221800 Sobic010G059000--Sobic002G383800 Sobic010G059000--Sobic002G305000 Sobic003G355200 Sobic003G355200 Sobic010G059000--Sobic003G355200 Sobic010G059000--Sobic010G205100 Sobic001G303100 Sobic001G303100 Sobic010G059000--Sobic001G303100 Sobic001G381600 Sobic001G381600 Sobic010G059000--Sobic001G381600 Sobic009G038900 Sobic009G038900 Sobic010G059000--Sobic009G038900 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic007G136200 Sobic007G136200 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic001G530900 Sobic001G530900 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic001G080700 Sobic001G080700 Sobic008G070800--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic008G070800--Sobic001G392300 Sobic006G185100 Sobic006G185100 Sobic008G070800--Sobic006G185100 Sobic005G059800 Sobic005G059800 Sobic008G070800--Sobic005G059800 Sobic001G151100 Sobic001G151100 Sobic008G070800--Sobic001G151100 Sobic002G047700 Sobic002G047700 Sobic008G070800--Sobic002G047700 Sobic002G294800 Sobic002G294800 Sobic008G070800--Sobic002G294800 Sobic008G070800--Sobic001G333100 Sobic008G070800--Sobic002G383800 Sobic002G309900--Sobic002G091600 Sobic002G309900--Sobic002G131200 Sobic002G309900--Sobic008G070800 Sobic001G085600 Sobic001G085600 Sobic002G309900--Sobic001G085600 Sobic002G309900--Sobic001G303100 Sobic006G092000 Sobic006G092000 Sobic002G309900--Sobic006G092000 Sobic005G100600 Sobic005G100600 Sobic002G309900--Sobic005G100600 Sobic002G111200 Sobic002G111200 Sobic002G309900--Sobic002G111200 Sobic001G257700 Sobic001G257700 Sobic002G309900--Sobic001G257700 Sobic002G383800--Sobic008G070800 Sobic003G221400 Sobic003G221400 Sobic002G383800--Sobic003G221400 Sobic002G383800--Sobic001G355800 Sobic002G383800--Sobic001G333100 Sobic002G383800--Sobic002G131200 Sobic008G054000 Sobic008G054000 Sobic002G383800--Sobic008G054000 Sobic002G383800--Sobic003G311900 Sobic002G311100 Sobic002G311100 Sobic002G383800--Sobic002G311100 Sobic004G131800 Sobic004G131800 Sobic002G383800--Sobic004G131800 Sobic004G134200 Sobic004G134200 Sobic003G011300--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic003G011300--Sobic001G374100 Sobic007G116200 Sobic007G116200 Sobic003G011300--Sobic007G116200 Sobic010G032900 Sobic010G032900 Sobic003G011300--Sobic010G032900 Sobic004G042200 Sobic004G042200 Sobic003G011300--Sobic004G042200 Sobic003G011300--Sobic005G059800 Sobic001G002000 Sobic001G002000 Sobic003G011300--Sobic001G002000 Sobic003G168100 Sobic003G168100 Sobic003G011300--Sobic003G168100 Sobic010G126000 Sobic010G126000 Sobic003G011300--Sobic010G126000 Sobic006G064100 Sobic006G064100 Sobic010G205100--Sobic006G064100 Sobic010G085100 Sobic010G085100 Sobic010G205100--Sobic010G085100 Sobic001G531500 Sobic001G531500 Sobic010G205100--Sobic001G531500 Sobic001G073900 Sobic001G073900 Sobic010G205100--Sobic001G073900 Sobic010G205100--Sobic009G038900 Sobic003G036200 Sobic003G036200 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic003G332700 Sobic003G332700 Sobic010G205100--Sobic003G332700 Sobic001G007000 Sobic001G007000 Sobic002G359400--Sobic001G007000 Sobic002G359400--Sobic001G392300 Sobic010G262000 Sobic010G262000 Sobic002G359400--Sobic010G262000 Sobic006G041600 Sobic006G041600 Sobic002G359400--Sobic006G041600 Sobic008G004600 Sobic008G004600 Sobic002G359400--Sobic008G004600 Sobic002G359400--Sobic002G305000 Sobic002G325300 Sobic002G325300 Sobic002G359400--Sobic002G325300 Sobic006G103200 Sobic006G103200 Sobic002G359400--Sobic006G103200 Sobic003G102400 Sobic003G102400 Sobic002G359400--Sobic003G102400
Octagon: transcription factors


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