Gene annotation
Transcriptome id Sobic.010G147000.1,Sobic.010G147000.2
Synonym Sb10g019660
Functional annotation tesmin/TSO1-like CXC domain containing protein, expressed
UniProt C5Z360 , A0A194YJB7
Pfam PF03638
Panther DB PTHR12446 PTHR12446:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29000 : Tesmin/TSO1-like CXC domain-containing protein
RAP-DB (Rice) LOC_Os06g22670.1 : tesmin/TSO1-like CXC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042830
Brachypodium KQK18273 , KQK18272 , PNT75882 , PNT75880 , PNT75881 , PNT75879
Barley HORVU7Hr1G081540.20 , HORVU7Hr1G081540.21 , HORVU7Hr1G081540.3 , HORVU7Hr1G081540.2 , HORVU7Hr1G081540.1 , HORVU7Hr1G081540.7 , HORVU7Hr1G081540.6 , HORVU7Hr1G081540.5 , HORVU7Hr1G081540.4 , HORVU7Hr1G081540.9 , HORVU7Hr1G081540.8 , HORVU7Hr1G081540.13 , HORVU7Hr1G081540.12 , HORVU7Hr1G081540.11 , HORVU7Hr1G081540.10 , HORVU7Hr1G081540.17 , HORVU7Hr1G081540.16 , HORVU7Hr1G081540.15 , HORVU7Hr1G081540.14 , HORVU7Hr1G081540.19 , HORVU7Hr1G081540.18
Wheat TraesCS7D02G338500 , TraesCS7B02G242300 , TraesCS7A02G341100 , TraesCS7A02G341100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
2 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
3 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
4 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
5 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
6 Sobic.008G070800 expressed protein -
7 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
8 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
9 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
10 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
11 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
12 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
13 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
14 Sobic.003G375200 mitotic checkpoint family protein, putative, expressed -
15 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
16 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
17 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
18 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
19 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
20 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G147000 Sobic010G147000 Sobic006G041600 Sobic006G041600 Sobic010G147000--Sobic006G041600 Sobic003G220800 Sobic003G220800 Sobic010G147000--Sobic003G220800 Sobic004G291900 Sobic004G291900 Sobic010G147000--Sobic004G291900 Sobic001G333100 Sobic001G333100 Sobic010G147000--Sobic001G333100 Sobic009G075800 Sobic009G075800 Sobic010G147000--Sobic009G075800 Sobic008G070800 Sobic008G070800 Sobic010G147000--Sobic008G070800 Sobic005G059800 Sobic005G059800 Sobic010G147000--Sobic005G059800 Sobic001G194200 Sobic001G194200 Sobic010G147000--Sobic001G194200 Sobic010G013200 Sobic010G013200 Sobic010G147000--Sobic010G013200 Sobic006G041600--Sobic001G194200 Sobic001G433800 Sobic001G433800 Sobic006G041600--Sobic001G433800 Sobic006G041600--Sobic004G291900 Sobic006G252900 Sobic006G252900 Sobic006G041600--Sobic006G252900 Sobic001G002000 Sobic001G002000 Sobic006G041600--Sobic001G002000 Sobic001G289800 Sobic001G289800 Sobic006G041600--Sobic001G289800 Sobic002G133300 Sobic002G133300 Sobic006G041600--Sobic002G133300 Sobic004G185800 Sobic004G185800 Sobic006G041600--Sobic004G185800 Sobic001G207000 Sobic001G207000 Sobic006G041600--Sobic001G207000 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic001G100900 Sobic001G100900 Sobic003G220800--Sobic001G100900 Sobic003G043300 Sobic003G043300 Sobic003G220800--Sobic003G043300 Sobic010G074300 Sobic010G074300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic003G220800--Sobic010G147000 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G174200 Sobic004G174200 Sobic004G291900--Sobic004G174200 Sobic004G276400 Sobic004G276400 Sobic004G291900--Sobic004G276400 Sobic005G001000 Sobic005G001000 Sobic004G291900--Sobic005G001000 Sobic004G034900 Sobic004G034900 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic004G291900--Sobic001G002000 Sobic010G010700 Sobic010G010700 Sobic004G291900--Sobic010G010700 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic009G222500 Sobic009G222500 Sobic009G075800--Sobic009G222500 Sobic004G275700 Sobic004G275700 Sobic009G075800--Sobic004G275700 Sobic009G075800--Sobic010G020400 Sobic001G199100 Sobic001G199100 Sobic009G075800--Sobic001G199100 Sobic008G004600 Sobic008G004600 Sobic009G075800--Sobic008G004600 Sobic003G012200 Sobic003G012200 Sobic009G075800--Sobic003G012200 Sobic006G136400 Sobic006G136400 Sobic009G075800--Sobic006G136400 Sobic001G392300 Sobic001G392300 Sobic009G075800--Sobic001G392300 Sobic007G071900 Sobic007G071900 Sobic009G075800--Sobic007G071900 Sobic001G080700 Sobic001G080700 Sobic008G070800--Sobic001G080700 Sobic008G070800--Sobic001G392300 Sobic006G185100 Sobic006G185100 Sobic008G070800--Sobic006G185100 Sobic008G070800--Sobic005G059800 Sobic001G151100 Sobic001G151100 Sobic008G070800--Sobic001G151100 Sobic008G070800--Sobic002G047700 Sobic002G294800 Sobic002G294800 Sobic008G070800--Sobic002G294800 Sobic008G070800--Sobic001G333100 Sobic002G383800 Sobic002G383800 Sobic008G070800--Sobic002G383800 Sobic010G032900 Sobic010G032900 Sobic005G059800--Sobic010G032900 Sobic005G059800--Sobic002G294800 Sobic005G059800--Sobic006G185100 Sobic005G059800--Sobic001G194200 Sobic003G155100 Sobic003G155100 Sobic005G059800--Sobic003G155100 Sobic003G011300 Sobic003G011300 Sobic005G059800--Sobic003G011300 Sobic008G044100 Sobic008G044100 Sobic005G059800--Sobic008G044100 Sobic005G059800--Sobic008G070800 Sobic003G398700 Sobic003G398700 Sobic005G059800--Sobic003G398700 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic008G001200 Sobic008G001200 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic001G268200 Sobic001G268200 Sobic010G013200--Sobic001G268200 Sobic008G081300 Sobic008G081300 Sobic010G013200--Sobic008G081300 Sobic002G311100 Sobic002G311100 Sobic010G013200--Sobic002G311100 Sobic001G049500 Sobic001G049500 Sobic010G013200--Sobic001G049500 Sobic010G013200--Sobic002G294800 Sobic006G086500 Sobic006G086500 Sobic010G013200--Sobic006G086500 Sobic009G201300 Sobic009G201300 Sobic010G013200--Sobic009G201300 Sobic009G074400 Sobic009G074400 Sobic010G013200--Sobic009G074400 Sobic010G147100 Sobic010G147100 Sobic010G013200--Sobic010G147100
Octagon: transcription factors


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