Gene annotation
Transcriptome id Sobic.004G018800.1
Synonym Sb04g001756
Functional annotation HVA22, putative, expressed
UniProt C5XT09
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42560 : Abscisic acid-responsive (TB2/DP1, HVA22) family protein
RAP-DB (Rice) LOC_Os03g04030.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a034921
Brachypodium KQJ92994 , KQJ92993
Barley HORVU6Hr1G012260.7 , HORVU6Hr1G012260.6 , HORVU6Hr1G012260.4 , HORVU6Hr1G012260.3 , HORVU6Hr1G012260.2 , HORVU6Hr1G012260.1 , HORVU6Hr1G012260.9 , HORVU6Hr1G012260.8 , HORVU6Hr1G012260.5 , HORVU6Hr1G012260.12 , HORVU6Hr1G012260.11 , HORVU6Hr1G012260.10
Wheat TraesCS6D02G065400 , TraesCS6A02G068000 , TraesCS6A02G068000 , TraesCS6B02G092100
Populus -


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cDNA sequences
Sobic.004G018800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G051500 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
2 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
3 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
4 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
5 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.004G348900 expressed protein -
7 Sobic.004G316900 autophagy-related protein 12, putative, expressed K08336: ubiquitin-like protein ATG12
8 Sobic.001G285300 expressed protein -
9 Sobic.001G543300 dehydrogenase, putative, expressed -
10 Sobic.001G078500 expressed protein -
11 Sobic.003G316850 - -
12 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
13 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
14 Sobic.002G418700 expressed protein -
15 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
16 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
17 Sobic.008G111700 expressed protein -
18 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
19 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
20 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G018800 Sobic004G018800 Sobic010G051500 Sobic010G051500 Sobic004G018800--Sobic010G051500 Sobic007G203700 Sobic007G203700 Sobic004G018800--Sobic007G203700 Sobic003G424800 Sobic003G424800 Sobic004G018800--Sobic003G424800 Sobic010G193800 Sobic010G193800 Sobic004G018800--Sobic010G193800 Sobic004G339200 Sobic004G339200 Sobic004G018800--Sobic004G339200 Sobic004G348900 Sobic004G348900 Sobic004G018800--Sobic004G348900 Sobic004G316900 Sobic004G316900 Sobic004G018800--Sobic004G316900 Sobic001G285300 Sobic001G285300 Sobic004G018800--Sobic001G285300 Sobic001G543300 Sobic001G543300 Sobic004G018800--Sobic001G543300 Sobic010G051500--Sobic004G018800 Sobic001G532100 Sobic001G532100 Sobic010G051500--Sobic001G532100 Sobic010G051500--Sobic001G285300 Sobic010G051500--Sobic007G203700 Sobic003G316850 Sobic003G316850 Sobic010G051500--Sobic003G316850 Sobic006G143500 Sobic006G143500 Sobic010G051500--Sobic006G143500 Sobic010G051500--Sobic003G424800 Sobic004G019600 Sobic004G019600 Sobic010G051500--Sobic004G019600 Sobic010G051500--Sobic010G193800 Sobic009G246950 Sobic009G246950 Sobic007G203700--Sobic009G246950 Sobic001G529000 Sobic001G529000 Sobic007G203700--Sobic001G529000 Sobic007G203700--Sobic010G193800 Sobic006G263900 Sobic006G263900 Sobic007G203700--Sobic006G263900 Sobic002G256300 Sobic002G256300 Sobic007G203700--Sobic002G256300 Sobic004G300900 Sobic004G300900 Sobic007G203700--Sobic004G300900 Sobic001G054200 Sobic001G054200 Sobic007G203700--Sobic001G054200 Sobic004G060600 Sobic004G060600 Sobic007G203700--Sobic004G060600 Sobic001G078500 Sobic001G078500 Sobic007G203700--Sobic001G078500 Sobic001G117400 Sobic001G117400 Sobic003G424800--Sobic001G117400 Sobic002G116200 Sobic002G116200 Sobic003G424800--Sobic002G116200 Sobic002G413400 Sobic002G413400 Sobic003G424800--Sobic002G413400 Sobic001G147100 Sobic001G147100 Sobic003G424800--Sobic001G147100 Sobic003G362400 Sobic003G362400 Sobic003G424800--Sobic003G362400 Sobic003G424800--Sobic001G529000 Sobic010G008100 Sobic010G008100 Sobic003G424800--Sobic010G008100 Sobic009G008600 Sobic009G008600 Sobic003G424800--Sobic009G008600 Sobic001G331900 Sobic001G331900 Sobic003G424800--Sobic001G331900 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic010G193800--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic004G339200--Sobic001G078500 Sobic002G400000 Sobic002G400000 Sobic004G339200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic004G339200--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic004G339200--Sobic009G171700 Sobic003G007500 Sobic003G007500 Sobic004G339200--Sobic003G007500 Sobic009G198500 Sobic009G198500 Sobic004G339200--Sobic009G198500 Sobic001G433400 Sobic001G433400 Sobic004G339200--Sobic001G433400 Sobic004G339200--Sobic001G439600 Sobic007G186300 Sobic007G186300 Sobic004G339200--Sobic007G186300 Sobic001G283200 Sobic001G283200 Sobic004G348900--Sobic001G283200 Sobic003G077900 Sobic003G077900 Sobic004G348900--Sobic003G077900 Sobic004G181900 Sobic004G181900 Sobic004G348900--Sobic004G181900 Sobic001G404100 Sobic001G404100 Sobic004G348900--Sobic001G404100 Sobic001G206900 Sobic001G206900 Sobic004G348900--Sobic001G206900 Sobic001G085100 Sobic001G085100 Sobic004G348900--Sobic001G085100 Sobic004G348900--Sobic002G400000 Sobic001G444300 Sobic001G444300 Sobic004G348900--Sobic001G444300 Sobic001G323000 Sobic001G323000 Sobic004G348900--Sobic001G323000 Sobic001G136900 Sobic001G136900 Sobic004G316900--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic004G316900--Sobic002G204000 Sobic004G316900--Sobic002G256300 Sobic004G316900--Sobic001G529000 Sobic004G316900--Sobic003G316850 Sobic004G316900--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic004G316900--Sobic004G226800 Sobic004G316900--Sobic007G203700 Sobic004G316900--Sobic001G439600 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic002G044000 Sobic002G044000 Sobic001G285300--Sobic002G044000 Sobic001G036700 Sobic001G036700 Sobic001G285300--Sobic001G036700 Sobic001G126200 Sobic001G126200 Sobic001G285300--Sobic001G126200 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic006G094600 Sobic006G094600 Sobic001G285300--Sobic006G094600 Sobic001G294200 Sobic001G294200 Sobic001G543300--Sobic001G294200 Sobic007G167700 Sobic007G167700 Sobic001G543300--Sobic007G167700 Sobic001G543300--Sobic007G203700 Sobic008G058300 Sobic008G058300 Sobic001G543300--Sobic008G058300 Sobic001G543300--Sobic004G316900 Sobic001G129300 Sobic001G129300 Sobic001G543300--Sobic001G129300 Sobic001G543300--Sobic004G060600 Sobic001G543300--Sobic004G018800 Sobic006G242300 Sobic006G242300 Sobic001G543300--Sobic006G242300
Octagon: transcription factors


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