Gene annotation
Transcriptome id Sobic.010G051500.1
Synonym Sb10g004490, TOPP3
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5Z4V4
Pfam PF16891 PF00149
Panther DB PTHR11668 PTHR11668:SF280
NCBI CDD -
KEGG Orthology K06269; serine/threonine-protein phosphatase PP1 catalytic subunit
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT1G64040 : type one serine/threonine protein phosphatase 3
RAP-DB (Rice) LOC_Os06g06880.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041612 , Zm00025a049916
Brachypodium KQK01402 , KQK01403 , KQK01405 , KQK19467 , KQK01404
Barley HORVU6Hr1G092900.1 , HORVU6Hr1G092760.2 , HORVU6Hr1G092760.1 , HORVU6Hr1G091550.1 , HORVU6Hr1G091550.2 , HORVU6Hr1G091550.3 , HORVU6Hr1G091550.4 , HORVU6Hr1G091550.5 , HORVU6Hr1G091550.6 , HORVU6Hr1G091550.7 , HORVU6Hr1G091550.8 , HORVU6Hr1G092770.1 , HORVU6Hr1G092770.2 , HORVU6Hr1G091550.12 , HORVU6Hr1G091550.13 , HORVU6Hr1G091550.16 , HORVU6Hr1G091550.14
Wheat TraesCS7B02G025800 , TraesCS6B02G436400 , TraesCS6B02G436400 , TraesCS7D02G124400 , TraesCS6D02G381300 , TraesCS6A02G396400 , TraesCS7A02G126500
Populus PNT31019


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cDNA sequences
Sobic.010G051500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G018800 HVA22, putative, expressed -
2 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
3 Sobic.001G285300 expressed protein -
4 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
5 Sobic.003G316850 - -
6 Sobic.006G143500 expressed protein -
7 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
8 Sobic.004G019600 histone deacetylase complex subunit SAP18, putative, expressed K14324: histone deacetylase complex subunit SAP18
9 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
11 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
12 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
13 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
14 Sobic.006G225300 expressed protein -
15 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
16 Sobic.001G346300 WD domain, G-beta repeat domain containing protein, expressed K12816: CDC40, pre-mRNA-processing factor 17
17 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
18 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
19 Sobic.009G231900 expressed protein -
20 Sobic.008G111700 expressed protein -


Gene co-expression network
sample Sobic010G051500 Sobic010G051500 Sobic004G018800 Sobic004G018800 Sobic010G051500--Sobic004G018800 Sobic001G532100 Sobic001G532100 Sobic010G051500--Sobic001G532100 Sobic001G285300 Sobic001G285300 Sobic010G051500--Sobic001G285300 Sobic007G203700 Sobic007G203700 Sobic010G051500--Sobic007G203700 Sobic003G316850 Sobic003G316850 Sobic010G051500--Sobic003G316850 Sobic006G143500 Sobic006G143500 Sobic010G051500--Sobic006G143500 Sobic003G424800 Sobic003G424800 Sobic010G051500--Sobic003G424800 Sobic004G019600 Sobic004G019600 Sobic010G051500--Sobic004G019600 Sobic010G193800 Sobic010G193800 Sobic010G051500--Sobic010G193800 Sobic004G018800--Sobic010G051500 Sobic004G018800--Sobic007G203700 Sobic004G018800--Sobic003G424800 Sobic004G018800--Sobic010G193800 Sobic004G339200 Sobic004G339200 Sobic004G018800--Sobic004G339200 Sobic004G348900 Sobic004G348900 Sobic004G018800--Sobic004G348900 Sobic004G316900 Sobic004G316900 Sobic004G018800--Sobic004G316900 Sobic004G018800--Sobic001G285300 Sobic001G543300 Sobic001G543300 Sobic004G018800--Sobic001G543300 Sobic008G137600 Sobic008G137600 Sobic001G532100--Sobic008G137600 Sobic001G036700 Sobic001G036700 Sobic001G532100--Sobic001G036700 Sobic001G532100--Sobic010G193800 Sobic001G532100--Sobic001G285300 Sobic001G294900 Sobic001G294900 Sobic001G532100--Sobic001G294900 Sobic007G152400 Sobic007G152400 Sobic001G532100--Sobic007G152400 Sobic006G225300 Sobic006G225300 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic002G044000 Sobic002G044000 Sobic001G285300--Sobic002G044000 Sobic001G285300--Sobic001G036700 Sobic001G126200 Sobic001G126200 Sobic001G285300--Sobic001G126200 Sobic003G420700 Sobic003G420700 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic006G094600 Sobic006G094600 Sobic001G285300--Sobic006G094600 Sobic009G246950 Sobic009G246950 Sobic007G203700--Sobic009G246950 Sobic001G529000 Sobic001G529000 Sobic007G203700--Sobic001G529000 Sobic007G203700--Sobic010G193800 Sobic006G263900 Sobic006G263900 Sobic007G203700--Sobic006G263900 Sobic002G256300 Sobic002G256300 Sobic007G203700--Sobic002G256300 Sobic004G300900 Sobic004G300900 Sobic007G203700--Sobic004G300900 Sobic001G054200 Sobic001G054200 Sobic007G203700--Sobic001G054200 Sobic004G060600 Sobic004G060600 Sobic007G203700--Sobic004G060600 Sobic001G078500 Sobic001G078500 Sobic007G203700--Sobic001G078500 Sobic003G316850--Sobic004G316900 Sobic001G501200 Sobic001G501200 Sobic003G316850--Sobic001G501200 Sobic003G316850--Sobic004G339200 Sobic003G316850--Sobic010G193800 Sobic002G204000 Sobic002G204000 Sobic003G316850--Sobic002G204000 Sobic009G256200 Sobic009G256200 Sobic003G316850--Sobic009G256200 Sobic003G316850--Sobic010G051500 Sobic010G221400 Sobic010G221400 Sobic003G316850--Sobic010G221400 Sobic003G316850--Sobic003G043400 Sobic004G032000 Sobic004G032000 Sobic006G143500--Sobic004G032000 Sobic006G143500--Sobic001G285300 Sobic006G143500--Sobic002G044000 Sobic001G517600 Sobic001G517600 Sobic006G143500--Sobic001G517600 Sobic006G143500--Sobic001G402300 Sobic006G143500--Sobic001G532100 Sobic003G358300 Sobic003G358300 Sobic006G143500--Sobic003G358300 Sobic006G143500--Sobic001G126200 Sobic001G402600 Sobic001G402600 Sobic006G143500--Sobic001G402600 Sobic001G117400 Sobic001G117400 Sobic003G424800--Sobic001G117400 Sobic002G116200 Sobic002G116200 Sobic003G424800--Sobic002G116200 Sobic002G413400 Sobic002G413400 Sobic003G424800--Sobic002G413400 Sobic001G147100 Sobic001G147100 Sobic003G424800--Sobic001G147100 Sobic003G362400 Sobic003G362400 Sobic003G424800--Sobic003G362400 Sobic003G424800--Sobic001G529000 Sobic010G008100 Sobic010G008100 Sobic003G424800--Sobic010G008100 Sobic009G008600 Sobic009G008600 Sobic003G424800--Sobic009G008600 Sobic001G331900 Sobic001G331900 Sobic003G424800--Sobic001G331900 Sobic004G019600--Sobic002G204000 Sobic001G346300 Sobic001G346300 Sobic004G019600--Sobic001G346300 Sobic001G114500 Sobic001G114500 Sobic004G019600--Sobic001G114500 Sobic010G220900 Sobic010G220900 Sobic004G019600--Sobic010G220900 Sobic006G087100 Sobic006G087100 Sobic004G019600--Sobic006G087100 Sobic001G152000 Sobic001G152000 Sobic004G019600--Sobic001G152000 Sobic009G258400 Sobic009G258400 Sobic004G019600--Sobic009G258400 Sobic004G212700 Sobic004G212700 Sobic004G019600--Sobic004G212700 Sobic009G231900 Sobic009G231900 Sobic004G019600--Sobic009G231900 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic010G193800--Sobic001G532100 Sobic010G193800--Sobic006G225300 Sobic010G193800--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950
Octagon: transcription factors


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