Gene annotation
Transcriptome id Sobic.010G121600.1
Synonym Sb10g010720
Functional annotation oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
UniProt C5Z8Z9
Pfam PF13532
Panther DB PTHR31573 PTHR31573:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22260 : oxidoreductase, 2OG-Fe(II) oxygenase family protein
RAP-DB (Rice) LOC_Os06g17830.1 : oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU0Hr1G039260.8 , HORVU0Hr1G039260.9 , HORVU0Hr1G039260.3 , HORVU0Hr1G039260.1 , HORVU0Hr1G039260.6 , HORVU0Hr1G039260.7 , HORVU0Hr1G039260.4 , HORVU0Hr1G039260.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G126200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
2 Sobic.010G144000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
3 Sobic.002G392600 zinc finger CCHC domain-containing protein 10, putative, expressed -
4 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.005G194800 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
6 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
7 Sobic.003G244800 - -
8 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
9 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
10 Sobic.002G324200 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
11 Sobic.010G028950 - -
12 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
13 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.005G014950 - -
15 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
17 Sobic.006G194300 DUF581 domain containing protein, expressed -
18 Sobic.010G042900 expressed protein -
19 Sobic.004G270000 coatomer subunit delta, putative, expressed -
20 Sobic.010G100366 - -


Gene co-expression network
sample Sobic010G121600 Sobic010G121600 Sobic008G126200 Sobic008G126200 Sobic010G121600--Sobic008G126200 Sobic010G144000 Sobic010G144000 Sobic010G121600--Sobic010G144000 Sobic002G392600 Sobic002G392600 Sobic010G121600--Sobic002G392600 Sobic005G012000 Sobic005G012000 Sobic010G121600--Sobic005G012000 Sobic005G194800 Sobic005G194800 Sobic010G121600--Sobic005G194800 Sobic001G221100 Sobic001G221100 Sobic010G121600--Sobic001G221100 Sobic003G244800 Sobic003G244800 Sobic010G121600--Sobic003G244800 Sobic001G428400 Sobic001G428400 Sobic010G121600--Sobic001G428400 Sobic009G032300 Sobic009G032300 Sobic010G121600--Sobic009G032300 Sobic006G184300 Sobic006G184300 Sobic008G126200--Sobic006G184300 SobicK024000 SobicK024000 Sobic008G126200--SobicK024000 Sobic002G270300 Sobic002G270300 Sobic008G126200--Sobic002G270300 Sobic007G023700 Sobic007G023700 Sobic008G126200--Sobic007G023700 Sobic008G009500 Sobic008G009500 Sobic008G126200--Sobic008G009500 Sobic001G347600 Sobic001G347600 Sobic008G126200--Sobic001G347600 Sobic008G126200--Sobic005G012000 Sobic003G093600 Sobic003G093600 Sobic008G126200--Sobic003G093600 Sobic002G108800 Sobic002G108800 Sobic008G126200--Sobic002G108800 Sobic003G436900 Sobic003G436900 Sobic010G144000--Sobic003G436900 Sobic005G142200 Sobic005G142200 Sobic010G144000--Sobic005G142200 Sobic002G221200 Sobic002G221200 Sobic010G144000--Sobic002G221200 Sobic004G317600 Sobic004G317600 Sobic010G144000--Sobic004G317600 Sobic004G121000 Sobic004G121000 Sobic010G144000--Sobic004G121000 Sobic001G240400 Sobic001G240400 Sobic010G144000--Sobic001G240400 Sobic004G092300 Sobic004G092300 Sobic010G144000--Sobic004G092300 Sobic001G305400 Sobic001G305400 Sobic010G144000--Sobic001G305400 Sobic008G045600 Sobic008G045600 Sobic010G144000--Sobic008G045600 Sobic004G263900 Sobic004G263900 Sobic002G392600--Sobic004G263900 Sobic003G437500 Sobic003G437500 Sobic002G392600--Sobic003G437500 Sobic005G162600 Sobic005G162600 Sobic002G392600--Sobic005G162600 Sobic003G074000 Sobic003G074000 Sobic002G392600--Sobic003G074000 Sobic001G149700 Sobic001G149700 Sobic002G392600--Sobic001G149700 Sobic001G039700 Sobic001G039700 Sobic002G392600--Sobic001G039700 Sobic006G257900 Sobic006G257900 Sobic002G392600--Sobic006G257900 Sobic007G007900 Sobic007G007900 Sobic002G392600--Sobic007G007900 Sobic007G063200 Sobic007G063200 Sobic002G392600--Sobic007G063200 Sobic003G044900 Sobic003G044900 Sobic005G012000--Sobic003G044900 Sobic002G039500 Sobic002G039500 Sobic005G012000--Sobic002G039500 Sobic005G012000--Sobic006G184300 Sobic005G012000--Sobic007G023700 Sobic005G012000--Sobic003G093600 Sobic005G012000--Sobic008G126200 Sobic006G194150 Sobic006G194150 Sobic005G012000--Sobic006G194150 Sobic002G221700 Sobic002G221700 Sobic005G012000--Sobic002G221700 Sobic007G073400 Sobic007G073400 Sobic005G012000--Sobic007G073400 Sobic005G194800--Sobic003G044900 Sobic002G430500 Sobic002G430500 Sobic005G194800--Sobic002G430500 Sobic001G056300 Sobic001G056300 Sobic005G194800--Sobic001G056300 Sobic005G194800--Sobic005G012000 Sobic005G194800--Sobic002G039500 Sobic009G214600 Sobic009G214600 Sobic005G194800--Sobic009G214600 Sobic001G253100 Sobic001G253100 Sobic005G194800--Sobic001G253100 Sobic004G143700 Sobic004G143700 Sobic005G194800--Sobic004G143700 Sobic002G115801 Sobic002G115801 Sobic005G194800--Sobic002G115801 Sobic001G221100--Sobic001G039700 Sobic001G221100--Sobic009G032300 Sobic010G042900 Sobic010G042900 Sobic001G221100--Sobic010G042900 Sobic003G145900 Sobic003G145900 Sobic001G221100--Sobic003G145900 Sobic004G027100 Sobic004G027100 Sobic001G221100--Sobic004G027100 Sobic004G034400 Sobic004G034400 Sobic001G221100--Sobic004G034400 Sobic004G330900 Sobic004G330900 Sobic001G221100--Sobic004G330900 Sobic005G014950 Sobic005G014950 Sobic001G221100--Sobic005G014950 Sobic002G197100 Sobic002G197100 Sobic001G221100--Sobic002G197100 Sobic002G410200 Sobic002G410200 Sobic003G244800--Sobic002G410200 Sobic004G076732 Sobic004G076732 Sobic003G244800--Sobic004G076732 SobicK009900 SobicK009900 Sobic003G244800--SobicK009900 Sobic003G244800--Sobic001G253100 Sobic009G209800 Sobic009G209800 Sobic003G244800--Sobic009G209800 Sobic003G244800--Sobic008G009500 Sobic008G042250 Sobic008G042250 Sobic003G244800--Sobic008G042250 Sobic004G212800 Sobic004G212800 Sobic003G244800--Sobic004G212800 Sobic008G049701 Sobic008G049701 Sobic003G244800--Sobic008G049701 Sobic004G077000 Sobic004G077000 Sobic001G428400--Sobic004G077000 Sobic009G117300 Sobic009G117300 Sobic001G428400--Sobic009G117300 Sobic004G211400 Sobic004G211400 Sobic001G428400--Sobic004G211400 Sobic001G428400--Sobic001G039700 Sobic004G006300 Sobic004G006300 Sobic001G428400--Sobic004G006300 Sobic008G034600 Sobic008G034600 Sobic001G428400--Sobic008G034600 Sobic003G043100 Sobic003G043100 Sobic001G428400--Sobic003G043100 Sobic009G117400 Sobic009G117400 Sobic001G428400--Sobic009G117400 Sobic008G136000 Sobic008G136000 Sobic001G428400--Sobic008G136000 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic006G092800 Sobic006G092800 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic006G128800 Sobic006G128800 Sobic009G032300--Sobic006G128800 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100
Octagon: transcription factors


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