Gene annotation
Transcriptome id Sobic.006G194300.1
Synonym Sb06g026710
Functional annotation DUF581 domain containing protein, expressed
UniProt C5YEN0
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47060 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os04g49670.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010028 , Zm00025a056704
Brachypodium KQJ84257 , PNT61725 , KQJ84260
Barley HORVU2Hr1G105060.1 , HORVU2Hr1G105010.3 , HORVU2Hr1G105010.2 , HORVU2Hr1G105010.1 , HORVU2Hr1G105100.3 , HORVU2Hr1G105100.2 , HORVU2Hr1G105100.4
Wheat -
Populus -


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cDNA sequences
Sobic.006G194300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G194150 - -
2 Sobic.008G126200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
3 Sobic.002G324200 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
4 Sobic.001G028800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
5 Sobic.009G183500 expressed protein -
6 Sobic.009G178600 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
7 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
8 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
9 Sobic.010G042900 expressed protein -
10 Sobic.009G030100 expressed protein -
11 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.005G003200 sugar-responsive gene(PubMedID : 25496467)@asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
13 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
14 Sobic.003G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.007G023700 MA3 domain containing protein, expressed -
17 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.004G297400 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05607: methylglutaconyl-CoA hydratase
19 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
20 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -


Gene co-expression network
sample Sobic006G194300 Sobic006G194300 Sobic006G194150 Sobic006G194150 Sobic006G194300--Sobic006G194150 Sobic008G126200 Sobic008G126200 Sobic006G194300--Sobic008G126200 Sobic002G324200 Sobic002G324200 Sobic006G194300--Sobic002G324200 Sobic001G028800 Sobic001G028800 Sobic006G194300--Sobic001G028800 Sobic009G183500 Sobic009G183500 Sobic006G194300--Sobic009G183500 Sobic009G178600 Sobic009G178600 Sobic006G194300--Sobic009G178600 Sobic006G184300 Sobic006G184300 Sobic006G194300--Sobic006G184300 Sobic003G305400 Sobic003G305400 Sobic006G194300--Sobic003G305400 Sobic010G042900 Sobic010G042900 Sobic006G194300--Sobic010G042900 Sobic001G032100 Sobic001G032100 Sobic006G194150--Sobic001G032100 Sobic005G012000 Sobic005G012000 Sobic006G194150--Sobic005G012000 Sobic005G085600 Sobic005G085600 Sobic006G194150--Sobic005G085600 Sobic006G194150--Sobic006G194300 Sobic003G296600 Sobic003G296600 Sobic006G194150--Sobic003G296600 Sobic006G194150--Sobic006G184300 Sobic003G293900 Sobic003G293900 Sobic006G194150--Sobic003G293900 Sobic006G194150--Sobic008G126200 Sobic003G397300 Sobic003G397300 Sobic006G194150--Sobic003G397300 Sobic008G126200--Sobic006G184300 SobicK024000 SobicK024000 Sobic008G126200--SobicK024000 Sobic002G270300 Sobic002G270300 Sobic008G126200--Sobic002G270300 Sobic007G023700 Sobic007G023700 Sobic008G126200--Sobic007G023700 Sobic008G009500 Sobic008G009500 Sobic008G126200--Sobic008G009500 Sobic001G347600 Sobic001G347600 Sobic008G126200--Sobic001G347600 Sobic008G126200--Sobic005G012000 Sobic003G093600 Sobic003G093600 Sobic008G126200--Sobic003G093600 Sobic002G108800 Sobic002G108800 Sobic008G126200--Sobic002G108800 Sobic006G209500 Sobic006G209500 Sobic002G324200--Sobic006G209500 Sobic004G271900 Sobic004G271900 Sobic002G324200--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic002G324200--Sobic010G263800 Sobic009G117400 Sobic009G117400 Sobic002G324200--Sobic009G117400 Sobic002G157300 Sobic002G157300 Sobic002G324200--Sobic002G157300 Sobic009G156000 Sobic009G156000 Sobic002G324200--Sobic009G156000 Sobic004G256600 Sobic004G256600 Sobic002G324200--Sobic004G256600 Sobic008G025900 Sobic008G025900 Sobic002G324200--Sobic008G025900 Sobic002G077200 Sobic002G077200 Sobic002G324200--Sobic002G077200 Sobic003G034500 Sobic003G034500 Sobic001G028800--Sobic003G034500 Sobic001G028800--Sobic006G194150 Sobic001G028800--Sobic003G293900 Sobic001G516500 Sobic001G516500 Sobic001G028800--Sobic001G516500 Sobic001G028800--Sobic006G194300 Sobic001G028800--Sobic008G126200 Sobic001G028800--Sobic006G184300 Sobic001G363100 Sobic001G363100 Sobic001G028800--Sobic001G363100 Sobic001G230700 Sobic001G230700 Sobic001G028800--Sobic001G230700 Sobic009G183500--Sobic007G023700 Sobic009G183500--Sobic003G093600 Sobic002G221900 Sobic002G221900 Sobic009G183500--Sobic002G221900 Sobic004G188300 Sobic004G188300 Sobic009G183500--Sobic004G188300 Sobic002G039500 Sobic002G039500 Sobic009G183500--Sobic002G039500 Sobic009G183500--Sobic003G034500 Sobic009G183500--Sobic008G126200 Sobic004G143700 Sobic004G143700 Sobic009G183500--Sobic004G143700 Sobic006G257900 Sobic006G257900 Sobic009G183500--Sobic006G257900 Sobic004G006300 Sobic004G006300 Sobic009G178600--Sobic004G006300 Sobic001G083600 Sobic001G083600 Sobic009G178600--Sobic001G083600 Sobic008G128600 Sobic008G128600 Sobic009G178600--Sobic008G128600 Sobic003G202800 Sobic003G202800 Sobic009G178600--Sobic003G202800 Sobic010G190600 Sobic010G190600 Sobic009G178600--Sobic010G190600 Sobic002G010300 Sobic002G010300 Sobic009G178600--Sobic002G010300 Sobic004G283000 Sobic004G283000 Sobic009G178600--Sobic004G283000 Sobic004G034400 Sobic004G034400 Sobic009G178600--Sobic004G034400 Sobic009G178600--Sobic006G209500 Sobic006G184300--Sobic002G108800 Sobic006G184300--Sobic007G023700 Sobic007G156500 Sobic007G156500 Sobic006G184300--Sobic007G156500 Sobic006G184300--Sobic002G039500 Sobic006G184300--Sobic008G126200 Sobic004G221900 Sobic004G221900 Sobic006G184300--Sobic004G221900 Sobic006G184300--Sobic005G012000 Sobic009G257300 Sobic009G257300 Sobic006G184300--Sobic009G257300 Sobic006G184300--Sobic003G093600 Sobic010G145900 Sobic010G145900 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic003G305400--Sobic006G209500 Sobic001G478300 Sobic001G478300 Sobic003G305400--Sobic001G478300 Sobic003G305400--Sobic001G347600 Sobic001G372000 Sobic001G372000 Sobic003G305400--Sobic001G372000 Sobic003G154700 Sobic003G154700 Sobic003G305400--Sobic003G154700 Sobic003G081100 Sobic003G081100 Sobic003G305400--Sobic003G081100 Sobic010G264400 Sobic010G264400 Sobic003G305400--Sobic010G264400 Sobic010G042900--Sobic003G093600 Sobic010G042900--Sobic007G023700 Sobic010G042900--Sobic001G347600 Sobic005G007800 Sobic005G007800 Sobic010G042900--Sobic005G007800 Sobic010G042900--Sobic004G034400 Sobic001G028700 Sobic001G028700 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700
Octagon: transcription factors


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