Gene annotation
Transcriptome id Sobic.006G202500.1
Synonym ATAOX1A, AOX1A, Sb06g027410
Functional annotation immutans protein, putative, expressed
UniProt C5YF55
Pfam PF01786
Panther DB PTHR31803 PTHR31803:SF4
NCBI CDD -
KEGG Orthology K17893; AOX1, ubiquinol oxidase
Gene Ontology GO:0009916; alternative oxidase activity


Orthologs (automatic annotation)
TAIR AT3G22370 : alternative oxidase 1A
RAP-DB (Rice) LOC_Os04g51150.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a009949 , Zm00025a009948 , Zm00025a009947 , Zm00025a021669
Brachypodium PNT69270 , KQJ84389 , KQK00893
Barley HORVU6Hr1G068150.4 , HORVU6Hr1G068150.5 , HORVU6Hr1G068150.6 , HORVU0Hr1G005420.4 , HORVU0Hr1G005420.3 , HORVU6Hr1G068150.2 , HORVU6Hr1G068150.3 , HORVU2Hr1G101920.2 , HORVU2Hr1G101920.1 , HORVU2Hr1G101990.2 , HORVU2Hr1G101990.1 , HORVU6Hr1G068150.1
Wheat TraesCS3B02G087900 , TraesCS6D02G245800 , TraesCS2B02G459300 , TraesCS2D02G436700 , TraesCS6A02G269100 , TraesCS2A02G439400 , TraesCS6B02G296400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G082400 cytochrome P450, putative, expressed -
2 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
3 Sobic.010G144400 glycosyltransferase, putative, expressed -
4 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
5 Sobic.001G064800 expp1 protein precursor, putative, expressed -
6 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
7 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
10 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
11 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
12 Sobic.007G049766 - -
13 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
15 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
16 Sobic.003G417350 - -
17 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
18 Sobic.004G274700 SNARE associated Golgi protein, putative, expressed -
19 Sobic.007G195100 peptidase, T1 family, putative, expressed K02732: 20S proteasome subunit beta 6
20 Sobic.007G095400 expressed protein -


Gene co-expression network
sample Sobic006G202500 Sobic006G202500 Sobic001G082400 Sobic001G082400 Sobic006G202500--Sobic001G082400 Sobic003G311700 Sobic003G311700 Sobic006G202500--Sobic003G311700 Sobic010G144400 Sobic010G144400 Sobic006G202500--Sobic010G144400 Sobic001G071100 Sobic001G071100 Sobic006G202500--Sobic001G071100 Sobic001G064800 Sobic001G064800 Sobic006G202500--Sobic001G064800 Sobic003G396000 Sobic003G396000 Sobic006G202500--Sobic003G396000 Sobic004G164500 Sobic004G164500 Sobic006G202500--Sobic004G164500 Sobic003G332401 Sobic003G332401 Sobic006G202500--Sobic003G332401 Sobic004G172700 Sobic004G172700 Sobic006G202500--Sobic004G172700 Sobic001G056700 Sobic001G056700 Sobic001G082400--Sobic001G056700 Sobic001G082400--Sobic001G071100 Sobic006G191600 Sobic006G191600 Sobic001G082400--Sobic006G191600 Sobic002G291300 Sobic002G291300 Sobic001G082400--Sobic002G291300 Sobic002G361001 Sobic002G361001 Sobic001G082400--Sobic002G361001 Sobic002G282400 Sobic002G282400 Sobic001G082400--Sobic002G282400 Sobic007G126100 Sobic007G126100 Sobic001G082400--Sobic007G126100 Sobic001G082400--Sobic004G164500 Sobic001G223100 Sobic001G223100 Sobic001G082400--Sobic001G223100 Sobic003G311700--Sobic003G332401 Sobic001G206000 Sobic001G206000 Sobic003G311700--Sobic001G206000 Sobic004G222600 Sobic004G222600 Sobic003G311700--Sobic004G222600 Sobic001G309500 Sobic001G309500 Sobic003G311700--Sobic001G309500 Sobic002G368400 Sobic002G368400 Sobic003G311700--Sobic002G368400 Sobic003G116600 Sobic003G116600 Sobic003G311700--Sobic003G116600 Sobic004G339300 Sobic004G339300 Sobic003G311700--Sobic004G339300 Sobic001G367000 Sobic001G367000 Sobic003G311700--Sobic001G367000 Sobic010G204300 Sobic010G204300 Sobic003G311700--Sobic010G204300 Sobic002G068300 Sobic002G068300 Sobic010G144400--Sobic002G068300 Sobic010G144400--Sobic001G056700 Sobic010G228600 Sobic010G228600 Sobic010G144400--Sobic010G228600 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic002G258100 Sobic002G258100 Sobic010G144400--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic010G144400--Sobic001G471900 Sobic001G253600 Sobic001G253600 Sobic010G144400--Sobic001G253600 Sobic010G176600 Sobic010G176600 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic002G393000 Sobic002G393000 Sobic001G071100--Sobic002G393000 Sobic002G183200 Sobic002G183200 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic010G153100 Sobic010G153100 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G445800 Sobic001G445800 Sobic001G064800--Sobic001G445800 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic001G441600 Sobic001G441600 Sobic003G396000--Sobic001G441600 Sobic006G218700 Sobic006G218700 Sobic003G396000--Sobic006G218700 Sobic003G379700 Sobic003G379700 Sobic003G396000--Sobic003G379700 Sobic003G396000--Sobic010G204300 Sobic001G076000 Sobic001G076000 Sobic003G396000--Sobic001G076000 Sobic003G396000--Sobic003G332401 Sobic004G293700 Sobic004G293700 Sobic003G396000--Sobic004G293700 Sobic001G478300 Sobic001G478300 Sobic003G396000--Sobic001G478300 Sobic009G059700 Sobic009G059700 Sobic003G396000--Sobic009G059700 Sobic004G164500--Sobic001G471900 Sobic001G311000 Sobic001G311000 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic008G106800 Sobic008G106800 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic010G154150 Sobic010G154150 Sobic004G164500--Sobic010G154150 Sobic006G257900 Sobic006G257900 Sobic004G164500--Sobic006G257900 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic002G296300 Sobic002G296300 Sobic003G332401--Sobic002G296300 Sobic003G115800 Sobic003G115800 Sobic003G332401--Sobic003G115800 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic003G332401--Sobic007G186300 Sobic002G090700 Sobic002G090700 Sobic003G332401--Sobic002G090700 Sobic003G007500 Sobic003G007500 Sobic003G332401--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic003G332401--Sobic001G054200 Sobic003G332401--Sobic002G368400 Sobic004G172700--Sobic009G016201 Sobic004G172700--Sobic010G144400 Sobic004G172700--Sobic002G282400 Sobic004G172700--Sobic002G261800 Sobic003G249800 Sobic003G249800 Sobic004G172700--Sobic003G249800 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic002G328300 Sobic002G328300 Sobic004G172700--Sobic002G328300 Sobic004G172700--Sobic001G064800
Octagon: transcription factors


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