Gene annotation
Transcriptome id Sobic.001G526100.2,Sobic.001G526100.1
Synonym Sb01g048960
Functional annotation uncharacterized Cys-rich domain containing protein, putative, expressed
UniProt A0A1B6QQV8 , A0A1B6QQX5
Pfam -
Panther DB PTHR31152:SF3 PTHR31152 PTHR31152 PTHR31152:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63830 : PLAC8 family protein
RAP-DB (Rice) LOC_Os03g03180.1 : uncharacterized Cys-rich domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053499 , Zm00025a052243
Brachypodium KQK23914 , KQK23913 , KQJ97589
Barley HORVU4Hr1G084670.1 , HORVU4Hr1G084670.3 , HORVU4Hr1G084670.2 , HORVU4Hr1G084670.5 , HORVU4Hr1G084670.4 , HORVU4Hr1G084670.7 , HORVU4Hr1G084670.6 , HORVU4Hr1G084670.9 , HORVU4Hr1G084670.8 , HORVU1Hr1G051580.5 , HORVU1Hr1G051580.6 , HORVU1Hr1G051580.7 , HORVU1Hr1G051580.1 , HORVU1Hr1G051580.2 , HORVU1Hr1G051580.8 , HORVU1Hr1G051580.9 , HORVU1Hr1G051580.16 , HORVU1Hr1G051580.14 , HORVU1Hr1G051580.12 , HORVU1Hr1G051580.13 , HORVU1Hr1G051580.10 , HORVU1Hr1G051580.11 , HORVU1Hr1G051580.18 , HORVU1Hr1G051580.19 , HORVU1Hr1G051580.23 , HORVU1Hr1G051580.15 , HORVU1Hr1G051580.22 , HORVU1Hr1G051580.21 , HORVU1Hr1G051580.20 , HORVU4Hr1G084670.11 , HORVU4Hr1G084670.10 , HORVU4Hr1G084670.12
Wheat TraesCS4B02G346000 , TraesCS5A02G514900 , TraesCS4D02G340900
Populus -


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cDNA sequences
Sobic.001G526100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
2 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
3 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
4 Sobic.001G064800 expp1 protein precursor, putative, expressed -
5 Sobic.010G065400 X0001, putative, expressed -
6 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
7 Sobic.003G381000 transcriptional regulator, putative, expressed -
8 Sobic.003G217100 Yip1 domain containing protein, expressed -
9 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
10 Sobic.006G262900 expressed protein -
11 Sobic.008G132800 expressed protein -
12 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
13 Sobic.003G277000 expressed protein -
14 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
15 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
16 Sobic.002G296300 expressed protein -
17 Sobic.007G195701 - -
18 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
19 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
20 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)


Gene co-expression network
sample Sobic001G526100 Sobic001G526100 Sobic001G309500 Sobic001G309500 Sobic001G526100--Sobic001G309500 Sobic002G078400 Sobic002G078400 Sobic001G526100--Sobic002G078400 Sobic004G157800 Sobic004G157800 Sobic001G526100--Sobic004G157800 Sobic001G064800 Sobic001G064800 Sobic001G526100--Sobic001G064800 Sobic010G065400 Sobic010G065400 Sobic001G526100--Sobic010G065400 Sobic004G196300 Sobic004G196300 Sobic001G526100--Sobic004G196300 Sobic003G381000 Sobic003G381000 Sobic001G526100--Sobic003G381000 Sobic003G217100 Sobic003G217100 Sobic001G526100--Sobic003G217100 Sobic002G368400 Sobic002G368400 Sobic001G526100--Sobic002G368400 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic001G309500--Sobic002G078400 Sobic001G309500--Sobic003G217100 Sobic001G309500--Sobic001G526100 Sobic002G090700 Sobic002G090700 Sobic001G309500--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic001G309500--Sobic008G132800 Sobic004G066800 Sobic004G066800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic004G157800--Sobic001G064800 Sobic004G157800--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G157800--Sobic006G182100 Sobic009G249000 Sobic009G249000 Sobic004G157800--Sobic009G249000 Sobic009G094450 Sobic009G094450 Sobic004G157800--Sobic009G094450 Sobic004G157800--Sobic001G526100 Sobic005G092800 Sobic005G092800 Sobic004G157800--Sobic005G092800 Sobic004G157800--Sobic001G445800 Sobic001G403700 Sobic001G403700 Sobic004G157800--Sobic001G403700 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic001G502200 Sobic001G502200 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic010G065400--Sobic004G196300 Sobic010G065400--Sobic003G362400 Sobic005G111100 Sobic005G111100 Sobic010G065400--Sobic005G111100 Sobic010G065400--Sobic009G198500 Sobic010G018400 Sobic010G018400 Sobic004G196300--Sobic010G018400 Sobic003G249800 Sobic003G249800 Sobic004G196300--Sobic003G249800 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic004G196300--Sobic003G155400 Sobic004G196300--Sobic002G078400 Sobic004G196300--Sobic006G182100 Sobic004G196300--Sobic004G066800 Sobic004G196300--Sobic010G153100 Sobic003G381000--Sobic001G526100 Sobic009G045800 Sobic009G045800 Sobic003G381000--Sobic009G045800 Sobic003G381000--Sobic002G078400 Sobic006G262900 Sobic006G262900 Sobic003G381000--Sobic006G262900 Sobic003G381000--Sobic001G309500 Sobic003G405900 Sobic003G405900 Sobic003G381000--Sobic003G405900 Sobic006G263900 Sobic006G263900 Sobic003G381000--Sobic006G263900 Sobic003G381000--Sobic010G065400 Sobic009G156300 Sobic009G156300 Sobic003G381000--Sobic009G156300 Sobic001G105100 Sobic001G105100 Sobic003G217100--Sobic001G105100 Sobic003G217100--Sobic002G090700 Sobic003G217100--Sobic008G132800 Sobic006G222400 Sobic006G222400 Sobic003G217100--Sobic006G222400 Sobic003G217100--Sobic001G309500 Sobic001G067900 Sobic001G067900 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic001G237500 Sobic001G237500 Sobic003G217100--Sobic001G237500 Sobic001G408100 Sobic001G408100 Sobic003G217100--Sobic001G408100 Sobic003G332401 Sobic003G332401 Sobic002G368400--Sobic003G332401 Sobic003G116600 Sobic003G116600 Sobic002G368400--Sobic003G116600 Sobic009G199700 Sobic009G199700 Sobic002G368400--Sobic009G199700 Sobic009G059700 Sobic009G059700 Sobic002G368400--Sobic009G059700 Sobic001G367000 Sobic001G367000 Sobic002G368400--Sobic001G367000 Sobic002G368400--Sobic001G526100 Sobic001G283500 Sobic001G283500 Sobic002G368400--Sobic001G283500 Sobic007G195701 Sobic007G195701 Sobic002G368400--Sobic007G195701 Sobic002G368400--Sobic001G309500
Octagon: transcription factors


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