Gene annotation
Transcriptome id Sobic.002G291300.1,Sobic.002G291300.5,Sobic.002G291300.2,Sobic.002G291300.3,Sobic.002G291300.4
Synonym NUDX23, Sb02g032260, ATNUDX23, ATNUDT23
Functional annotation hydrolase, NUDIX family protein, expressed
UniProt A0A1W0W667 , C5X7Q3 , A0A1W0W6A0
Pfam PF00293 PF14803 PF14803
Panther DB PTHR22769 PTHR22769:SF3
NCBI CDD -
KEGG Orthology K18453; ADP-ribose/FAD diphosphatase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT2G42070 : nudix hydrolase homolog 23
RAP-DB (Rice) LOC_Os09g38040.1 : hydrolase, NUDIX family protein, expressed
MaizeGDB (Corn) Zm00025a014530 , Zm00025a047947
Brachypodium KQJ91388
Barley HORVU5Hr1G087800.18 , HORVU5Hr1G087800.19 , HORVU5Hr1G087800.14 , HORVU5Hr1G087800.15 , HORVU5Hr1G087800.16 , HORVU5Hr1G087800.17 , HORVU5Hr1G087800.10 , HORVU5Hr1G087800.11 , HORVU5Hr1G087800.12 , HORVU5Hr1G087800.13 , HORVU5Hr1G087800.6 , HORVU5Hr1G087800.7 , HORVU5Hr1G087800.5 , HORVU5Hr1G087800.2 , HORVU5Hr1G087800.3 , HORVU5Hr1G087800.1 , HORVU5Hr1G087800.8 , HORVU5Hr1G087800.9 , HORVU5Hr1G087800.21 , HORVU5Hr1G087800.20
Wheat TraesCS5A02G353800 , TraesCS5A02G353800 , TraesCS5B02G356400 , TraesCS5B02G356400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
2 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
3 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
4 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.001G230700 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
6 Sobic.001G471900 C2 domain containing protein, putative, expressed -
7 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
8 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
9 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
10 Sobic.001G082400 cytochrome P450, putative, expressed -
11 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
12 Sobic.002G278300 thaumatin, putative, expressed -
13 Sobic.008G106800 isoflavone reductase, putative, expressed -
14 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
15 Sobic.005G195100 expressed protein -
16 Sobic.002G282400 expressed protein -
17 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
18 Sobic.010G253800 expressed protein -
19 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.010G228600 LSM domain containing protein, expressed -


Gene co-expression network
sample Sobic002G291300 Sobic002G291300 Sobic001G371300 Sobic001G371300 Sobic002G291300--Sobic001G371300 Sobic001G056700 Sobic001G056700 Sobic002G291300--Sobic001G056700 Sobic003G273100 Sobic003G273100 Sobic002G291300--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic002G291300--Sobic001G427800 Sobic001G230700 Sobic001G230700 Sobic002G291300--Sobic001G230700 Sobic001G471900 Sobic001G471900 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic001G478300 Sobic001G478300 Sobic002G291300--Sobic001G478300 Sobic004G164500 Sobic004G164500 Sobic002G291300--Sobic004G164500 Sobic001G371300--Sobic003G273100 Sobic001G371300--Sobic002G291300 Sobic001G371300--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic001G371300--Sobic004G274700 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic001G371300--Sobic010G083700 Sobic001G371300--Sobic001G056700 Sobic001G149700 Sobic001G149700 Sobic001G371300--Sobic001G149700 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic010G228600 Sobic010G228600 Sobic001G056700--Sobic010G228600 Sobic010G144400 Sobic010G144400 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic002G278300 Sobic002G278300 Sobic001G056700--Sobic002G278300 Sobic003G273100--Sobic001G371300 Sobic003G273100--Sobic001G149700 Sobic003G273100--Sobic001G478300 Sobic003G273100--Sobic004G274700 Sobic003G273100--Sobic002G291300 Sobic003G273100--Sobic001G427800 Sobic004G231400 Sobic004G231400 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic003G273100--Sobic004G079100 Sobic001G427800--Sobic001G478300 Sobic001G427800--Sobic001G149700 Sobic010G071200 Sobic010G071200 Sobic001G427800--Sobic010G071200 Sobic001G427800--Sobic003G273100 Sobic001G427800--Sobic001G371300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic008G142700 Sobic008G142700 Sobic001G427800--Sobic008G142700 Sobic003G350600 Sobic003G350600 Sobic001G427800--Sobic003G350600 Sobic001G230700--Sobic002G291300 Sobic003G296600 Sobic003G296600 Sobic001G230700--Sobic003G296600 Sobic006G184300 Sobic006G184300 Sobic001G230700--Sobic006G184300 Sobic008G106800 Sobic008G106800 Sobic001G230700--Sobic008G106800 Sobic001G230700--Sobic004G164500 Sobic003G293900 Sobic003G293900 Sobic001G230700--Sobic003G293900 Sobic001G516500 Sobic001G516500 Sobic001G230700--Sobic001G516500 Sobic001G311000 Sobic001G311000 Sobic001G230700--Sobic001G311000 Sobic007G150200 Sobic007G150200 Sobic001G230700--Sobic007G150200 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic010G154150 Sobic010G154150 Sobic001G471900--Sobic010G154150 Sobic001G471900--Sobic002G291300 Sobic006G257900 Sobic006G257900 Sobic001G471900--Sobic006G257900 Sobic001G471900--Sobic010G144400 Sobic001G471900--Sobic003G273100 Sobic007G177100 Sobic007G177100 Sobic007G126100--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic007G126100--Sobic004G212900 Sobic002G421600 Sobic002G421600 Sobic007G126100--Sobic002G421600 Sobic002G254200 Sobic002G254200 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic009G159200 Sobic009G159200 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic006G157500 Sobic006G157500 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G478300--Sobic001G427800 Sobic001G478300--Sobic001G149700 Sobic010G055500 Sobic010G055500 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic001G478300--Sobic003G273100 Sobic001G478300--Sobic004G274700 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic004G164500--Sobic010G228600 Sobic004G164500--Sobic007G177100
Octagon: transcription factors


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