Gene annotation
Transcriptome id Sobic.005G195100.3,Sobic.005G195100.2,Sobic.005G195100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PTJ0
Pfam -
Panther DB PTHR33167 PTHR33167:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67390 : -
RAP-DB (Rice) LOC_Os11g41600.1,LOC_Os11g41600.2 : expressed protein
MaizeGDB (Corn) Zm00025a043011 , Zm00025a043016 , Zm00025a029285
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
2 Sobic.005G195200 expressed protein -
3 Sobic.003G228000 cytochrome P450 72A1, putative, expressed -
4 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
6 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
7 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
9 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
10 Sobic.003G275100 green ripe-like, putative, expressed -
11 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
12 Sobic.002G282400 expressed protein -
13 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
14 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
15 Sobic.010G253800 expressed protein -
16 Sobic.006G264300 GA18008-PA, putative, expressed -
17 Sobic.006G141500 expressed protein -
18 Sobic.006G159300 remorin, putative, expressed -
19 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
20 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic005G195100 Sobic005G195100 Sobic002G180600 Sobic002G180600 Sobic005G195100--Sobic002G180600 Sobic005G195200 Sobic005G195200 Sobic005G195100--Sobic005G195200 Sobic003G228000 Sobic003G228000 Sobic005G195100--Sobic003G228000 Sobic001G329100 Sobic001G329100 Sobic005G195100--Sobic001G329100 Sobic002G291300 Sobic002G291300 Sobic005G195100--Sobic002G291300 Sobic004G293700 Sobic004G293700 Sobic005G195100--Sobic004G293700 Sobic010G071900 Sobic010G071900 Sobic005G195100--Sobic010G071900 Sobic010G121300 Sobic010G121300 Sobic005G195100--Sobic010G121300 Sobic002G212200 Sobic002G212200 Sobic005G195100--Sobic002G212200 Sobic002G264400 Sobic002G264400 Sobic002G180600--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic010G253800 Sobic010G253800 Sobic002G180600--Sobic010G253800 Sobic006G141500 Sobic006G141500 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic002G180600--Sobic001G329100 Sobic002G180600--Sobic010G071900 Sobic005G195200--Sobic001G329100 Sobic005G195200--Sobic005G195100 Sobic005G195200--Sobic002G180600 Sobic004G183400 Sobic004G183400 Sobic005G195200--Sobic004G183400 Sobic006G254800 Sobic006G254800 Sobic005G195200--Sobic006G254800 Sobic007G062600 Sobic007G062600 Sobic005G195200--Sobic007G062600 Sobic002G122700 Sobic002G122700 Sobic005G195200--Sobic002G122700 Sobic005G195200--Sobic010G253800 Sobic006G225600 Sobic006G225600 Sobic005G195200--Sobic006G225600 Sobic003G228000--Sobic010G071900 Sobic003G228000--Sobic005G195100 Sobic010G243200 Sobic010G243200 Sobic003G228000--Sobic010G243200 Sobic010G185500 Sobic010G185500 Sobic003G228000--Sobic010G185500 Sobic003G228000--Sobic002G180600 Sobic003G228000--Sobic010G121300 Sobic003G228000--Sobic010G253800 Sobic003G228000--Sobic002G282400 Sobic001G319500 Sobic001G319500 Sobic003G228000--Sobic001G319500 Sobic001G329100--Sobic006G264300 Sobic001G329100--Sobic005G195200 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic001G329100--Sobic010G253800 Sobic001G329100--Sobic002G122700 Sobic001G329100--Sobic006G254800 Sobic001G371300 Sobic001G371300 Sobic002G291300--Sobic001G371300 Sobic001G056700 Sobic001G056700 Sobic002G291300--Sobic001G056700 Sobic003G273100 Sobic003G273100 Sobic002G291300--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic002G291300--Sobic001G427800 Sobic001G230700 Sobic001G230700 Sobic002G291300--Sobic001G230700 Sobic001G471900 Sobic001G471900 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic001G478300 Sobic001G478300 Sobic002G291300--Sobic001G478300 Sobic004G164500 Sobic004G164500 Sobic002G291300--Sobic004G164500 Sobic004G293700--Sobic010G253800 Sobic004G079100 Sobic004G079100 Sobic004G293700--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic004G293700--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic004G293700--Sobic002G264400 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic009G178100 Sobic009G178100 Sobic010G121300--Sobic009G178100 Sobic002G155500 Sobic002G155500 Sobic010G121300--Sobic002G155500 Sobic004G225500 Sobic004G225500 Sobic010G121300--Sobic004G225500 Sobic010G121300--Sobic006G141500 Sobic003G253000 Sobic003G253000 Sobic010G121300--Sobic003G253000 Sobic009G185800 Sobic009G185800 Sobic010G121300--Sobic009G185800 Sobic001G415500 Sobic001G415500 Sobic010G121300--Sobic001G415500 Sobic004G300900 Sobic004G300900 Sobic010G121300--Sobic004G300900 Sobic009G146100 Sobic009G146100 Sobic010G121300--Sobic009G146100 Sobic005G228000 Sobic005G228000 Sobic002G212200--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic002G212200--Sobic001G019900 Sobic001G067601 Sobic001G067601 Sobic002G212200--Sobic001G067601 Sobic007G107000 Sobic007G107000 Sobic002G212200--Sobic007G107000 Sobic003G181500 Sobic003G181500 Sobic002G212200--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic002G212200--Sobic003G162700 Sobic009G023200 Sobic009G023200 Sobic002G212200--Sobic009G023200 Sobic002G212200--Sobic002G282400 Sobic001G064800 Sobic001G064800 Sobic002G212200--Sobic001G064800
Octagon: transcription factors


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