Gene annotation
Transcriptome id Sobic.009G080200.1
Synonym Sb09g006700, PYL8, RCAR3
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
CAPIP1, putative, expressed
UniProt C5YUR3
Pfam PF10604
Panther DB PTHR31213 PTHR31213:SF4
NCBI CDD -
KEGG Orthology K14496; abscisic acid receptor PYR/PYL family
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53160 : regulatory components of ABA receptor 3
RAP-DB (Rice) LOC_Os05g12260.1 : CAPIP1, putative, expressed
MaizeGDB (Corn) Zm00025a043117 , Zm00025a037590
Brachypodium KQK07027
Barley HORVU1Hr1G030390.1 , HORVU1Hr1G030410.2 , HORVU0Hr1G032390.2 , HORVU0Hr1G032390.1 , HORVU1Hr1G030390.3 , HORVU1Hr1G030390.2 , HORVU1Hr1G030390.4 , HORVU1Hr1G030390.5
Wheat TraesCS1B02G145800 , TraesCS1D02G126900 , TraesCS1A02G126800
Populus -


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cDNA sequences
Sobic.009G080200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G013600 expressed protein -
2 Sobic.001G285000 - -
3 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
4 Sobic.004G275200 zinc-binding protein, putative, expressed -
5 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
6 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
8 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G194700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.003G078800 PB1 domain containing protein, expressed -
11 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
12 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
13 Sobic.006G152600 - -
14 Sobic.002G338300 expressed protein -
15 Sobic.003G085700 expressed protein -
16 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
17 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
18 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
19 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
20 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G


Gene co-expression network
sample Sobic009G080200 Sobic009G080200 Sobic003G013600 Sobic003G013600 Sobic009G080200--Sobic003G013600 Sobic001G285000 Sobic001G285000 Sobic009G080200--Sobic001G285000 Sobic002G117200 Sobic002G117200 Sobic009G080200--Sobic002G117200 Sobic004G275200 Sobic004G275200 Sobic009G080200--Sobic004G275200 Sobic002G123200 Sobic002G123200 Sobic009G080200--Sobic002G123200 Sobic009G156300 Sobic009G156300 Sobic009G080200--Sobic009G156300 Sobic003G123300 Sobic003G123300 Sobic009G080200--Sobic003G123300 Sobic001G078200 Sobic001G078200 Sobic009G080200--Sobic001G078200 Sobic002G194700 Sobic002G194700 Sobic009G080200--Sobic002G194700 Sobic003G013600--Sobic003G123300 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic001G225600 Sobic001G225600 Sobic003G013600--Sobic001G225600 Sobic001G530350 Sobic001G530350 Sobic003G013600--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G013600--Sobic010G267000 Sobic003G296300 Sobic003G296300 Sobic003G013600--Sobic003G296300 Sobic001G293800 Sobic001G293800 Sobic003G013600--Sobic001G293800 Sobic001G225400 Sobic001G225400 Sobic003G013600--Sobic001G225400 Sobic001G285000--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic001G285000--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G285000--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic001G285000--Sobic002G117200 Sobic001G410100 Sobic001G410100 Sobic001G285000--Sobic001G410100 Sobic001G285000--Sobic003G296300 Sobic001G285000--Sobic001G530350 Sobic002G117200--Sobic009G156300 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic002G117200--Sobic009G080200 Sobic006G152600 Sobic006G152600 Sobic004G275200--Sobic006G152600 Sobic007G148200 Sobic007G148200 Sobic004G275200--Sobic007G148200 Sobic004G275200--Sobic001G293800 Sobic008G094700 Sobic008G094700 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic004G275200--Sobic009G080200 Sobic009G199700 Sobic009G199700 Sobic002G123200--Sobic009G199700 Sobic007G079700 Sobic007G079700 Sobic002G123200--Sobic007G079700 Sobic001G136900 Sobic001G136900 Sobic002G123200--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic002G123200--Sobic002G204000 Sobic002G123200--Sobic002G117200 Sobic004G186000 Sobic004G186000 Sobic002G123200--Sobic004G186000 Sobic008G128600 Sobic008G128600 Sobic002G123200--Sobic008G128600 Sobic007G126200 Sobic007G126200 Sobic002G123200--Sobic007G126200 Sobic003G250500 Sobic003G250500 Sobic002G123200--Sobic003G250500 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G156300--Sobic009G131100 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic003G123300--Sobic003G013600 Sobic001G465100 Sobic001G465100 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic006G241350 Sobic006G241350 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic003G123300--Sobic001G530350 Sobic003G123300--Sobic010G267000 Sobic001G191200 Sobic001G191200 Sobic001G078200--Sobic001G191200 Sobic005G085200 Sobic005G085200 Sobic001G078200--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic001G078200--Sobic010G057300 Sobic004G285800 Sobic004G285800 Sobic001G078200--Sobic004G285800 Sobic005G085600 Sobic005G085600 Sobic001G078200--Sobic005G085600 Sobic001G423100 Sobic001G423100 Sobic001G078200--Sobic001G423100 Sobic003G406700 Sobic003G406700 Sobic001G078200--Sobic003G406700 Sobic009G159700 Sobic009G159700 Sobic001G078200--Sobic009G159700 Sobic009G213400 Sobic009G213400 Sobic001G078200--Sobic009G213400 Sobic002G194700--Sobic009G080200 Sobic007G038800 Sobic007G038800 Sobic002G194700--Sobic007G038800 Sobic001G127400 Sobic001G127400 Sobic002G194700--Sobic001G127400 Sobic007G117100 Sobic007G117100 Sobic002G194700--Sobic007G117100 Sobic001G108900 Sobic001G108900 Sobic002G194700--Sobic001G108900 Sobic009G063301 Sobic009G063301 Sobic002G194700--Sobic009G063301 Sobic003G024800 Sobic003G024800 Sobic002G194700--Sobic003G024800 Sobic007G002200 Sobic007G002200 Sobic002G194700--Sobic007G002200 Sobic003G034400 Sobic003G034400 Sobic002G194700--Sobic003G034400
Octagon: transcription factors


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