Gene annotation
Transcriptome id Sobic.006G167800.4,Sobic.006G167800.5,Sobic.006G167800.3,Sobic.006G167800.1,Sobic.006G167800.2
Synonym SbERF65, ATERF-1, ethylene response factor 65, Sb06g024355, ERF-1
Functional annotation Not investigated (PubMedID : 23766026)
ethylene-responsive transcription factor, putative, expressed
UniProt C5YDE6
Pfam PF00847
Panther DB PTHR31190
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G17500 : ethylene responsive element binding factor 1
RAP-DB (Rice) LOC_Os04g46220.1 : ethylene-responsive transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a010340 , Zm00025a056885 , Zm00025a020895 , Zm00025a038708
Brachypodium KQK05592 , KQJ83906 , KQK01869 , KQK23628 , KQJ91651 , KQK00588 , KQK00586
Barley HORVU6Hr1G074970.3 , HORVU6Hr1G074970.2 , HORVU6Hr1G074970.1 , HORVU6Hr1G062430.1 , HORVU6Hr1G062380.3 , HORVU6Hr1G062380.2 , HORVU6Hr1G062380.1 , HORVU6Hr1G062380.5 , HORVU6Hr1G062380.4 , HORVU1Hr1G055710.1 , HORVU1Hr1G055710.3 , HORVU4Hr1G080300.1 , HORVU3Hr1G059250.2 , HORVU3Hr1G059250.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G167800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.003G296300 WRKY13, expressed -
3 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
4 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
5 Sobic.010G157500 zinc finger protein, putative, expressed -
6 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
7 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.001G144400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
10 Sobic.003G085700 expressed protein -
11 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
12 Sobic.001G285000 - -
13 Sobic.003G013600 expressed protein -
14 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
15 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
16 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
17 Sobic.001G088300 - -
18 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
19 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
20 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic006G167800 Sobic006G167800 Sobic001G526000 Sobic001G526000 Sobic006G167800--Sobic001G526000 Sobic003G296300 Sobic003G296300 Sobic006G167800--Sobic003G296300 Sobic004G110400 Sobic004G110400 Sobic006G167800--Sobic004G110400 Sobic002G376000 Sobic002G376000 Sobic006G167800--Sobic002G376000 Sobic010G157500 Sobic010G157500 Sobic006G167800--Sobic010G157500 Sobic001G093900 Sobic001G093900 Sobic006G167800--Sobic001G093900 Sobic009G067400 Sobic009G067400 Sobic006G167800--Sobic009G067400 Sobic001G195100 Sobic001G195100 Sobic006G167800--Sobic001G195100 Sobic001G144400 Sobic001G144400 Sobic006G167800--Sobic001G144400 Sobic001G526000--Sobic006G167800 Sobic001G526000--Sobic003G296300 Sobic001G088300 Sobic001G088300 Sobic001G526000--Sobic001G088300 Sobic001G526000--Sobic001G195100 Sobic009G100500 Sobic009G100500 Sobic001G526000--Sobic009G100500 Sobic001G314800 Sobic001G314800 Sobic001G526000--Sobic001G314800 Sobic006G259000 Sobic006G259000 Sobic001G526000--Sobic006G259000 Sobic007G090300 Sobic007G090300 Sobic001G526000--Sobic007G090300 Sobic001G526000--Sobic004G110400 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic003G296300--Sobic006G167800 Sobic003G296300--Sobic001G093900 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic004G110400--Sobic006G167800 Sobic004G110400--Sobic001G314800 Sobic004G110400--Sobic001G526000 Sobic004G333300 Sobic004G333300 Sobic004G110400--Sobic004G333300 Sobic005G155600 Sobic005G155600 Sobic004G110400--Sobic005G155600 Sobic004G110400--Sobic003G296300 Sobic004G110400--Sobic002G376000 Sobic002G269400 Sobic002G269400 Sobic004G110400--Sobic002G269400 Sobic004G110400--Sobic001G345400 Sobic002G376000--Sobic006G167800 Sobic001G288100 Sobic001G288100 Sobic002G376000--Sobic001G288100 Sobic010G179800 Sobic010G179800 Sobic002G376000--Sobic010G179800 Sobic002G376000--Sobic001G526000 Sobic002G376000--Sobic001G093900 Sobic001G024500 Sobic001G024500 Sobic002G376000--Sobic001G024500 Sobic002G376000--Sobic002G269400 Sobic002G376000--Sobic004G110400 Sobic001G075000 Sobic001G075000 Sobic002G376000--Sobic001G075000 Sobic010G157500--Sobic003G296300 Sobic009G038200 Sobic009G038200 Sobic010G157500--Sobic009G038200 Sobic010G157500--Sobic006G167800 Sobic003G013600 Sobic003G013600 Sobic010G157500--Sobic003G013600 Sobic003G065600 Sobic003G065600 Sobic010G157500--Sobic003G065600 Sobic002G209100 Sobic002G209100 Sobic010G157500--Sobic002G209100 Sobic008G018600 Sobic008G018600 Sobic010G157500--Sobic008G018600 Sobic004G195800 Sobic004G195800 Sobic010G157500--Sobic004G195800 Sobic010G157500--Sobic001G093900 Sobic001G093900--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G093900--Sobic001G530350 Sobic001G093900--Sobic001G024500 Sobic001G182600 Sobic001G182600 Sobic001G093900--Sobic001G182600 Sobic001G093900--Sobic006G167800 Sobic001G093900--Sobic002G376000 Sobic001G093900--Sobic001G526000 Sobic001G093900--Sobic001G075000 Sobic001G093900--Sobic003G013600 Sobic010G018300 Sobic010G018300 Sobic009G067400--Sobic010G018300 Sobic009G216050 Sobic009G216050 Sobic009G067400--Sobic009G216050 Sobic001G381300 Sobic001G381300 Sobic009G067400--Sobic001G381300 Sobic001G146400 Sobic001G146400 Sobic009G067400--Sobic001G146400 Sobic004G209500 Sobic004G209500 Sobic009G067400--Sobic004G209500 Sobic009G121600 Sobic009G121600 Sobic009G067400--Sobic009G121600 Sobic005G226100 Sobic005G226100 Sobic009G067400--Sobic005G226100 Sobic005G041000 Sobic005G041000 Sobic009G067400--Sobic005G041000 Sobic002G407200 Sobic002G407200 Sobic009G067400--Sobic002G407200 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic001G195100--Sobic003G296300 Sobic006G190000 Sobic006G190000 Sobic001G144400--Sobic006G190000 Sobic001G144400--Sobic006G167800 Sobic001G144400--Sobic002G376000 Sobic006G097800 Sobic006G097800 Sobic001G144400--Sobic006G097800 Sobic001G144400--Sobic010G018300 Sobic003G123300 Sobic003G123300 Sobic001G144400--Sobic003G123300 Sobic001G144400--Sobic001G526000 Sobic010G210600 Sobic010G210600 Sobic001G144400--Sobic010G210600 Sobic002G067000 Sobic002G067000 Sobic001G144400--Sobic002G067000
Octagon: transcription factors


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