Gene annotation
| Transcriptome id | Sobic.002G327900.3,Sobic.002G327900.2,Sobic.002G327900.4,Sobic.002G327900.1 |
|---|---|
| Synonym | Sb02g035460 |
| Functional annotation | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| UniProt | A0A1B6QEQ7 , A0A1B6QER6 , A0A1B6QES1 |
| Pfam | PF07983 PF00332 PF00332 PF07983 |
| Panther DB | PTHR32227 PTHR32227:SF101 PTHR32227:SF101 PTHR32227 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0004553; hydrolase activity, hydrolyzing O-glycosyl compounds GO:0005975carbohydrate metabolic process GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
Orthologs (automatic annotation)
| TAIR | AT5G55180 : O-Glycosyl hydrolases family 17 protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g35350.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a048296 , Zm00025a048291 , Zm00025a014851 , Zm00025a022261 |
| Brachypodium | KQJ86083 , PNT62429 |
| Barley | HORVU7Hr1G091100.10 , HORVU7Hr1G091100.11 , HORVU7Hr1G091100.12 , HORVU7Hr1G091100.13 , HORVU7Hr1G091100.8 , HORVU7Hr1G091100.9 , HORVU7Hr1G091100.2 , HORVU7Hr1G091100.3 , HORVU7Hr1G091100.1 , HORVU7Hr1G091100.6 , HORVU7Hr1G091100.7 , HORVU7Hr1G091100.4 , HORVU2Hr1G044460.4 , HORVU2Hr1G044460.2 , HORVU2Hr1G044460.3 , HORVU2Hr1G044460.1 |
| Wheat | TraesCS2A02G216200 , TraesCS6D02G305000 , TraesCS2D02G221800 , TraesCS6B02G355600 , TraesCS7B02G285700 , TraesCS7B02G285700 , TraesCS2B02G241300 , TraesCS1A02G422500 , TraesCS1D02G431300 , TraesCS6A02G325300 , TraesCS1B02G453900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G258300 | aspartic proteinase nepenthesin-2 precursor, putative, expressed | - |
| 2 | Sobic.002G327700 | TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 3 | Sobic.002G327800 | TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 4 | Sobic.010G128000 | aspartic proteinase nepenthesin-2 precursor, putative, expressed | - |
| 5 | Sobic.008G146700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed | - |
| 6 | Sobic.007G070400 | 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed | - |
| 7 | Sobic.005G084300 | glycosyl hydrolase, putative, expressed | - |
| 8 | Sobic.008G182900 | thaumatin, putative, expressed | - |
| 9 | Sobic.001G184100 | Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed | K03549: KUP system potassium uptake protein |
| 10 | Sobic.008G151000 | wall-associated receptor kinase 3 precursor, putative, expressed | - |
| 11 | Sobic.007G213300 | glycerophosphoryl diester phosphodiesterase family protein, putative, expressed | - |
| 12 | Sobic.003G049500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter family protein, putative, expressed | - |
| 13 | Sobic.007G058800 | O-methyltransferase, putative, expressed | K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase |
| 14 | Sobic.001G435500 | tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed | - |
| 15 | Sobic.008G104801 | - | - |
| 16 | Sobic.007G059100 | O-methyltransferase, putative, expressed | K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase |
| 17 | Sobic.001G070500 | Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed | K02694: photosystem I subunit III |
| 18 | Sobic.009G229700 | Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein | K02695: photosystem I subunit VI |
| 19 | Sobic.004G144700 | ABC transporter family protein, putative, expressed | - |
| 20 | Sobic.002G033900 | Photosystem I reaction center subunit psaK(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed | K02698: photosystem I subunit X |
Gene co-expression network
Octagon: transcription factors
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