Gene annotation
Transcriptome id Sobic.008G151000.1
Synonym Sb08g020035, WAK2
Functional annotation wall-associated receptor kinase 3 precursor, putative, expressed
UniProt C5YQY1
Pfam PF07645 PF13947 PF00069
Panther DB PTHR27005 PTHR27005:SF68
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005509; calcium ion binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G21270 : wall-associated kinase 2
RAP-DB (Rice) LOC_Os04g20680.1 : wall-associated receptor kinase 3 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G001020.4 , HORVU3Hr1G001020.1 , HORVU3Hr1G001020.2
Wheat TraesCS2B02G563800 , TraesCS6B02G009100 , TraesCS6B02G009105
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
2 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
3 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
4 Sobic.004G152100 expressed protein -
5 Sobic.001G186200 pentatricopeptide, putative, expressed -
6 Sobic.007G201400 pentatricopeptide, putative, expressed -
7 Sobic.001G333000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
8 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
10 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
11 Sobic.003G114100 expressed protein -
12 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
13 Sobic.006G248200 - -
14 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
15 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
16 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
17 Sobic.007G213300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
18 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
19 Sobic.003G381300 expressed protein -
20 Sobic.006G256600 expressed protein -


Gene co-expression network
sample Sobic008G151000 Sobic008G151000 Sobic005G127000 Sobic005G127000 Sobic008G151000--Sobic005G127000 Sobic006G047300 Sobic006G047300 Sobic008G151000--Sobic006G047300 Sobic003G265500 Sobic003G265500 Sobic008G151000--Sobic003G265500 Sobic004G152100 Sobic004G152100 Sobic008G151000--Sobic004G152100 Sobic001G186200 Sobic001G186200 Sobic008G151000--Sobic001G186200 Sobic007G201400 Sobic007G201400 Sobic008G151000--Sobic007G201400 Sobic001G333000 Sobic001G333000 Sobic008G151000--Sobic001G333000 Sobic004G314800 Sobic004G314800 Sobic008G151000--Sobic004G314800 Sobic007G059500 Sobic007G059500 Sobic008G151000--Sobic007G059500 Sobic005G127000--Sobic007G059500 Sobic008G183200 Sobic008G183200 Sobic005G127000--Sobic008G183200 Sobic010G241300 Sobic010G241300 Sobic005G127000--Sobic010G241300 Sobic004G122200 Sobic004G122200 Sobic005G127000--Sobic004G122200 Sobic001G377500 Sobic001G377500 Sobic005G127000--Sobic001G377500 Sobic005G127000--Sobic001G186200 Sobic010G225600 Sobic010G225600 Sobic005G127000--Sobic010G225600 Sobic001G498300 Sobic001G498300 Sobic005G127000--Sobic001G498300 Sobic005G127000--Sobic008G151000 Sobic004G040600 Sobic004G040600 Sobic006G047300--Sobic004G040600 Sobic006G091300 Sobic006G091300 Sobic006G047300--Sobic006G091300 Sobic001G460200 Sobic001G460200 Sobic006G047300--Sobic001G460200 Sobic004G015700 Sobic004G015700 Sobic006G047300--Sobic004G015700 Sobic003G225100 Sobic003G225100 Sobic006G047300--Sobic003G225100 Sobic006G111600 Sobic006G111600 Sobic006G047300--Sobic006G111600 Sobic003G267500 Sobic003G267500 Sobic006G047300--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic006G047300--Sobic007G015300 Sobic006G047300--Sobic003G265500 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic010G221600 Sobic010G221600 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic001G391900 Sobic001G391900 Sobic004G152100--Sobic001G391900 Sobic001G447700 Sobic001G447700 Sobic004G152100--Sobic001G447700 Sobic010G218600 Sobic010G218600 Sobic004G152100--Sobic010G218600 Sobic004G152100--Sobic003G085000 Sobic006G256600 Sobic006G256600 Sobic004G152100--Sobic006G256600 Sobic003G170200 Sobic003G170200 Sobic004G152100--Sobic003G170200 Sobic004G152100--Sobic005G127000 Sobic002G281800 Sobic002G281800 Sobic004G152100--Sobic002G281800 Sobic002G102200 Sobic002G102200 Sobic004G152100--Sobic002G102200 Sobic007G085800 Sobic007G085800 Sobic001G186200--Sobic007G085800 Sobic003G439000 Sobic003G439000 Sobic001G186200--Sobic003G439000 Sobic001G455500 Sobic001G455500 Sobic001G186200--Sobic001G455500 Sobic006G210400 Sobic006G210400 Sobic001G186200--Sobic006G210400 Sobic003G342200 Sobic003G342200 Sobic001G186200--Sobic003G342200 Sobic008G063200 Sobic008G063200 Sobic001G186200--Sobic008G063200 Sobic005G111500 Sobic005G111500 Sobic001G186200--Sobic005G111500 Sobic001G168800 Sobic001G168800 Sobic001G186200--Sobic001G168800 Sobic001G450600 Sobic001G450600 Sobic001G186200--Sobic001G450600 Sobic003G074700 Sobic003G074700 Sobic007G201400--Sobic003G074700 Sobic001G495300 Sobic001G495300 Sobic007G201400--Sobic001G495300 Sobic001G142400 Sobic001G142400 Sobic007G201400--Sobic001G142400 Sobic003G114100 Sobic003G114100 Sobic007G201400--Sobic003G114100 Sobic008G131700 Sobic008G131700 Sobic007G201400--Sobic008G131700 Sobic005G084000 Sobic005G084000 Sobic007G201400--Sobic005G084000 Sobic005G022800 Sobic005G022800 Sobic007G201400--Sobic005G022800 Sobic007G210600 Sobic007G210600 Sobic007G201400--Sobic007G210600 Sobic001G099000 Sobic001G099000 Sobic007G201400--Sobic001G099000 Sobic003G221700 Sobic003G221700 Sobic001G333000--Sobic003G221700 Sobic002G305700 Sobic002G305700 Sobic001G333000--Sobic002G305700 Sobic001G531200 Sobic001G531200 Sobic001G333000--Sobic001G531200 Sobic010G095200 Sobic010G095200 Sobic001G333000--Sobic010G095200 Sobic006G248200 Sobic006G248200 Sobic001G333000--Sobic006G248200 Sobic001G240000 Sobic001G240000 Sobic001G333000--Sobic001G240000 Sobic003G386300 Sobic003G386300 Sobic001G333000--Sobic003G386300 Sobic002G251400 Sobic002G251400 Sobic001G333000--Sobic002G251400 Sobic002G297400 Sobic002G297400 Sobic001G333000--Sobic002G297400 Sobic004G314800--Sobic002G305700 Sobic004G314800--Sobic006G248200 Sobic006G280050 Sobic006G280050 Sobic004G314800--Sobic006G280050 Sobic004G314800--Sobic006G111600 Sobic003G328200 Sobic003G328200 Sobic004G314800--Sobic003G328200 Sobic007G171800 Sobic007G171800 Sobic004G314800--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic004G314800--Sobic002G131700 Sobic007G034500 Sobic007G034500 Sobic004G314800--Sobic007G034500 Sobic003G330100 Sobic003G330100 Sobic004G314800--Sobic003G330100 Sobic007G059500--Sobic005G127000 Sobic007G059500--Sobic010G241300 Sobic007G059500--Sobic008G183200 Sobic007G059500--Sobic001G498300 Sobic007G059500--Sobic001G377500 Sobic007G059500--Sobic010G218600 Sobic008G063100 Sobic008G063100 Sobic007G059500--Sobic008G063100 Sobic002G281000 Sobic002G281000 Sobic007G059500--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic007G059500--Sobic005G021600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.