Gene annotation
Transcriptome id Sobic.001G291600.1
Synonym
Functional annotation -
UniProt A0A1B6QLT5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.005G145950 - -
3 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
4 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.010G240400 beta-expansin precursor, putative, expressed -
6 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.001G311866 - -
10 Sobic.008G182400 thaumatin, putative, expressed -
11 Sobic.005G131400 - -
12 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
13 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G140200 AP2 domain containing protein, expressed -
15 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
16 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
17 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
18 Sobic.004G104500 PPR repeat domain containing protein, putative, expressed -
19 Sobic.008G182800 thaumatin, putative, expressed -
20 Sobic.003G035801 - -


Gene co-expression network
sample Sobic001G291600 Sobic001G291600 Sobic009G073500 Sobic009G073500 Sobic001G291600--Sobic009G073500 Sobic005G145950 Sobic005G145950 Sobic001G291600--Sobic005G145950 Sobic001G099400 Sobic001G099400 Sobic001G291600--Sobic001G099400 Sobic002G065800 Sobic002G065800 Sobic001G291600--Sobic002G065800 Sobic010G240400 Sobic010G240400 Sobic001G291600--Sobic010G240400 Sobic010G172800 Sobic010G172800 Sobic001G291600--Sobic010G172800 Sobic005G126100 Sobic005G126100 Sobic001G291600--Sobic005G126100 Sobic008G146700 Sobic008G146700 Sobic001G291600--Sobic008G146700 Sobic001G311866 Sobic001G311866 Sobic001G291600--Sobic001G311866 Sobic008G182800 Sobic008G182800 Sobic009G073500--Sobic008G182800 Sobic009G073500--Sobic010G240400 Sobic009G073500--Sobic001G291600 Sobic005G169200 Sobic005G169200 Sobic009G073500--Sobic005G169200 Sobic009G073500--Sobic001G099400 Sobic010G231000 Sobic010G231000 Sobic009G073500--Sobic010G231000 Sobic009G073500--Sobic002G065800 Sobic008G182400 Sobic008G182400 Sobic009G073500--Sobic008G182400 Sobic005G084300 Sobic005G084300 Sobic009G073500--Sobic005G084300 Sobic005G145950--Sobic002G065800 Sobic005G145950--Sobic001G311866 Sobic005G145950--Sobic001G099400 Sobic005G145950--Sobic001G291600 Sobic005G145950--Sobic008G182400 Sobic010G140200 Sobic010G140200 Sobic005G145950--Sobic010G140200 Sobic005G145950--Sobic005G126100 Sobic002G065500 Sobic002G065500 Sobic005G145950--Sobic002G065500 Sobic004G104500 Sobic004G104500 Sobic005G145950--Sobic004G104500 Sobic001G099400--Sobic002G065800 Sobic001G099400--Sobic008G182400 Sobic001G099400--Sobic002G065500 Sobic002G065600 Sobic002G065600 Sobic001G099400--Sobic002G065600 Sobic001G099400--Sobic010G172800 Sobic001G099400--Sobic005G126100 Sobic006G117400 Sobic006G117400 Sobic001G099400--Sobic006G117400 Sobic001G099400--Sobic005G145950 Sobic004G197100 Sobic004G197100 Sobic001G099400--Sobic004G197100 Sobic002G065800--Sobic002G065500 Sobic002G065800--Sobic008G182400 Sobic002G065800--Sobic001G099400 Sobic002G065800--Sobic005G126100 Sobic002G065800--Sobic002G065600 Sobic002G065800--Sobic005G145950 Sobic002G065800--Sobic004G197100 Sobic002G065800--Sobic010G172800 Sobic002G065800--Sobic010G140200 Sobic010G240400--Sobic009G073500 Sobic010G240400--Sobic010G231000 Sobic010G240400--Sobic005G126100 Sobic010G240400--Sobic005G084300 Sobic010G240400--Sobic008G146700 Sobic010G240400--Sobic010G172800 Sobic007G059100 Sobic007G059100 Sobic010G240400--Sobic007G059100 Sobic010G240400--Sobic001G291600 Sobic010G240400--Sobic008G182400 Sobic010G172800--Sobic005G126100 Sobic010G172800--Sobic002G065500 Sobic010G172800--Sobic008G182400 Sobic010G172800--Sobic002G065600 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic010G172800--Sobic006G117400 Sobic005G126100--Sobic002G065500 Sobic005G126100--Sobic010G172800 Sobic005G126100--Sobic002G065800 Sobic005G126100--Sobic008G182400 Sobic005G126100--Sobic010G231000 Sobic005G126100--Sobic002G065600 Sobic005G126100--Sobic001G099400 Sobic005G126100--Sobic004G197100 Sobic002G065700 Sobic002G065700 Sobic005G126100--Sobic002G065700 Sobic008G146700--Sobic005G084300 Sobic004G258300 Sobic004G258300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic002G327900 Sobic002G327900 Sobic008G146700--Sobic002G327900 Sobic008G182900 Sobic008G182900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic008G146700--Sobic002G327700 Sobic002G327800 Sobic002G327800 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500 Sobic001G311866--Sobic005G145950 Sobic001G311866--Sobic002G065800 Sobic001G311866--Sobic004G197100 Sobic001G311866--Sobic001G099400 Sobic007G077832 Sobic007G077832 Sobic001G311866--Sobic007G077832 Sobic001G311866--Sobic001G291600 Sobic001G311866--Sobic008G182400 Sobic001G311866--Sobic005G126100 Sobic001G311866--Sobic002G065500
Octagon: transcription factors


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