Gene annotation
Transcriptome id Sobic.005G131700.1
Synonym
Functional annotation -
UniProt A0A1B6PS73
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
2 Sobic.005G037100 receptor-like protein kinase, putative, expressed -
3 Sobic.005G136300 chalcone synthase(PubMedID : 26317421)@only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
4 Sobic.002G000400 "A single-copy gene, share a similar catalytic mechanism with the licorice and Medicago truncatula FNSIIs (CYP93B subfamily) by converting flavanones to flavone through the formation of 2-hydroxyflavanones, CYP93B subfamily"(PubMedID : 20007684)@enzyme relate to flavone pathway(PubMedID : 27917182)@cytochrome P450, putative, expressed -
5 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
7 Sobic.008G182600 thaumatin, putative, expressed -
8 Sobic.006G226800 enzyme relate to 3-deoxyanthocyanidine pathway P/tan gene(PubMedID : 26994288)@leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
9 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
10 Sobic.003G216232 - -
11 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
13 Sobic.007G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
14 Sobic.001G409200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
15 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
16 Sobic.001G145700 thaumatin, putative, expressed -
17 Sobic.005G101500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dirigent, putative, expressed -
18 Sobic.008G182800 thaumatin, putative, expressed -
19 Sobic.008G182300 thaumatin, putative, expressed -
20 Sobic.010G004200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 domain containing protein, expressed -


Gene co-expression network
sample Sobic005G131700 Sobic005G131700 Sobic005G126200 Sobic005G126200 Sobic005G131700--Sobic005G126200 Sobic005G037100 Sobic005G037100 Sobic005G131700--Sobic005G037100 Sobic005G136300 Sobic005G136300 Sobic005G131700--Sobic005G136300 Sobic002G000400 Sobic002G000400 Sobic005G131700--Sobic002G000400 Sobic003G031100 Sobic003G031100 Sobic005G131700--Sobic003G031100 Sobic006G132500 Sobic006G132500 Sobic005G131700--Sobic006G132500 Sobic008G182600 Sobic008G182600 Sobic005G131700--Sobic008G182600 Sobic006G226800 Sobic006G226800 Sobic005G131700--Sobic006G226800 Sobic001G401300 Sobic001G401300 Sobic005G131700--Sobic001G401300 Sobic005G126200--Sobic005G131700 Sobic005G126200--Sobic008G182600 Sobic009G073500 Sobic009G073500 Sobic005G126200--Sobic009G073500 Sobic008G182800 Sobic008G182800 Sobic005G126200--Sobic008G182800 Sobic005G126200--Sobic006G226800 Sobic005G126200--Sobic003G031100 Sobic001G145700 Sobic001G145700 Sobic005G126200--Sobic001G145700 Sobic006G117400 Sobic006G117400 Sobic005G126200--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic005G126200--Sobic009G181200 Sobic005G037100--Sobic001G401300 Sobic005G037100--Sobic005G131700 Sobic005G037100--Sobic006G132500 Sobic005G037100--Sobic005G136300 Sobic003G280900 Sobic003G280900 Sobic005G037100--Sobic003G280900 Sobic001G010400 Sobic001G010400 Sobic005G037100--Sobic001G010400 Sobic005G037100--Sobic002G000400 Sobic010G210200 Sobic010G210200 Sobic005G037100--Sobic010G210200 Sobic002G333900 Sobic002G333900 Sobic005G037100--Sobic002G333900 Sobic005G136300--Sobic002G000400 Sobic005G137200 Sobic005G137200 Sobic005G136300--Sobic005G137200 Sobic005G137000 Sobic005G137000 Sobic005G136300--Sobic005G137000 Sobic005G136300--Sobic001G401300 Sobic010G004200 Sobic010G004200 Sobic005G136300--Sobic010G004200 Sobic003G215800 Sobic003G215800 Sobic005G136300--Sobic003G215800 Sobic005G137100 Sobic005G137100 Sobic005G136300--Sobic005G137100 Sobic005G136300--Sobic006G226800 Sobic005G117400 Sobic005G117400 Sobic005G136300--Sobic005G117400 Sobic002G000400--Sobic005G136300 Sobic002G000400--Sobic005G137000 Sobic002G000400--Sobic005G137200 Sobic002G000400--Sobic006G226800 Sobic002G000400--Sobic005G131700 Sobic002G000400--Sobic010G004200 Sobic002G000400--Sobic001G401300 Sobic003G216232 Sobic003G216232 Sobic002G000400--Sobic003G216232 Sobic002G000400--Sobic005G037100 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic006G132500--Sobic010G210200 Sobic008G182300 Sobic008G182300 Sobic006G132500--Sobic008G182300 Sobic003G244600 Sobic003G244600 Sobic006G132500--Sobic003G244600 Sobic005G169400 Sobic005G169400 Sobic006G132500--Sobic005G169400 Sobic001G145600 Sobic001G145600 Sobic006G132500--Sobic001G145600 Sobic003G111300 Sobic003G111300 Sobic006G132500--Sobic003G111300 Sobic005G215900 Sobic005G215900 Sobic006G132500--Sobic005G215900 Sobic002G023300 Sobic002G023300 Sobic006G132500--Sobic002G023300 Sobic006G132500--Sobic001G145700 Sobic008G182600--Sobic008G182800 Sobic005G169200 Sobic005G169200 Sobic008G182600--Sobic005G169200 Sobic008G182600--Sobic008G182300 Sobic008G182600--Sobic001G145700 Sobic008G182600--Sobic006G117400 Sobic008G182600--Sobic009G181200 Sobic008G182600--Sobic005G126200 Sobic008G182600--Sobic009G073500 Sobic008G182400 Sobic008G182400 Sobic008G182600--Sobic008G182400 Sobic006G226800--Sobic005G126200 Sobic006G226800--Sobic005G136300 Sobic006G226800--Sobic002G000400 Sobic005G224900 Sobic005G224900 Sobic006G226800--Sobic005G224900 Sobic006G226800--Sobic005G131700 Sobic006G226800--Sobic003G031100 Sobic006G226800--Sobic003G216232 Sobic009G041000 Sobic009G041000 Sobic006G226800--Sobic009G041000 Sobic001G409200 Sobic001G409200 Sobic006G226800--Sobic001G409200 Sobic001G401200 Sobic001G401200 Sobic001G401300--Sobic001G401200 Sobic001G400700 Sobic001G400700 Sobic001G401300--Sobic001G400700 Sobic008G034500 Sobic008G034500 Sobic001G401300--Sobic008G034500 Sobic001G401300--Sobic003G215800 Sobic001G401300--Sobic002G333900 Sobic008G191600 Sobic008G191600 Sobic001G401300--Sobic008G191600 Sobic001G247900 Sobic001G247900 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic009G043600 Sobic009G043600 Sobic001G401300--Sobic009G043600
Octagon: transcription factors


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