Gene annotation
Transcriptome id Sobic.001G261600.1
Synonym Sb01g024390
Functional annotation cellulase, putative, expressed
UniProt C5WN99
Pfam PF00150
Panther DB PTHR10551 PTHR10551:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0007015actin filament organization


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g22520.1 : cellulase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5A02G052700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
2 Sobic.005G171100 - -
3 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.005G093400 expressed protein -
5 Sobic.008G182900 thaumatin, putative, expressed -
6 Sobic.008G142100 No apical meristem protein, putative, expressed -
7 Sobic.010G045000 VQ domain containing protein, putative -
8 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.010G155300 VQ domain containing protein, putative, expressed -
11 Sobic.002G067300 ATPase, putative, expressed -
12 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
13 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
14 Sobic.001G291600 - -
15 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
16 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
18 Sobic.002G195200 - -
19 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -


Gene co-expression network
sample Sobic001G261600 Sobic001G261600 Sobic006G021900 Sobic006G021900 Sobic001G261600--Sobic006G021900 Sobic005G171100 Sobic005G171100 Sobic001G261600--Sobic005G171100 Sobic008G146700 Sobic008G146700 Sobic001G261600--Sobic008G146700 Sobic005G093400 Sobic005G093400 Sobic001G261600--Sobic005G093400 Sobic008G182900 Sobic008G182900 Sobic001G261600--Sobic008G182900 Sobic008G142100 Sobic008G142100 Sobic001G261600--Sobic008G142100 Sobic010G045000 Sobic010G045000 Sobic001G261600--Sobic010G045000 Sobic003G031100 Sobic003G031100 Sobic001G261600--Sobic003G031100 Sobic001G319100 Sobic001G319100 Sobic001G261600--Sobic001G319100 Sobic006G021900--Sobic005G093400 Sobic005G021950 Sobic005G021950 Sobic006G021900--Sobic005G021950 Sobic006G021900--Sobic001G261600 Sobic002G067300 Sobic002G067300 Sobic006G021900--Sobic002G067300 Sobic001G410450 Sobic001G410450 Sobic006G021900--Sobic001G410450 Sobic007G129201 Sobic007G129201 Sobic006G021900--Sobic007G129201 Sobic009G181300 Sobic009G181300 Sobic006G021900--Sobic009G181300 Sobic008G074500 Sobic008G074500 Sobic006G021900--Sobic008G074500 Sobic009G252100 Sobic009G252100 Sobic006G021900--Sobic009G252100 Sobic005G171100--Sobic008G146700 Sobic005G171100--Sobic010G045000 Sobic003G291700 Sobic003G291700 Sobic005G171100--Sobic003G291700 Sobic006G246200 Sobic006G246200 Sobic005G171100--Sobic006G246200 Sobic006G231600 Sobic006G231600 Sobic005G171100--Sobic006G231600 Sobic002G209100 Sobic002G209100 Sobic005G171100--Sobic002G209100 Sobic005G082700 Sobic005G082700 Sobic005G171100--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic005G171100--Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic005G171100--Sobic001G136300 Sobic005G084300 Sobic005G084300 Sobic008G146700--Sobic005G084300 Sobic004G258300 Sobic004G258300 Sobic008G146700--Sobic004G258300 Sobic008G146700--Sobic005G171100 Sobic002G327900 Sobic002G327900 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic010G240400 Sobic010G240400 Sobic008G146700--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic008G146700--Sobic002G327700 Sobic002G327800 Sobic002G327800 Sobic008G146700--Sobic002G327800 Sobic009G073500 Sobic009G073500 Sobic008G146700--Sobic009G073500 Sobic008G038100 Sobic008G038100 Sobic005G093400--Sobic008G038100 Sobic005G093400--Sobic002G209100 Sobic009G038200 Sobic009G038200 Sobic005G093400--Sobic009G038200 Sobic009G205600 Sobic009G205600 Sobic005G093400--Sobic009G205600 Sobic004G349300 Sobic004G349300 Sobic005G093400--Sobic004G349300 Sobic003G264901 Sobic003G264901 Sobic005G093400--Sobic003G264901 Sobic005G093400--Sobic001G410450 Sobic009G233900 Sobic009G233900 Sobic005G093400--Sobic009G233900 Sobic004G195800 Sobic004G195800 Sobic005G093400--Sobic004G195800 Sobic008G182900--Sobic008G146700 Sobic008G182900--Sobic002G327800 Sobic008G182900--Sobic004G258300 Sobic008G182900--Sobic002G327700 Sobic008G182900--Sobic002G327900 Sobic008G182900--Sobic005G171100 Sobic008G182900--Sobic005G084300 Sobic008G182900--Sobic002G209100 Sobic005G063900 Sobic005G063900 Sobic008G182900--Sobic005G063900 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic008G142100--Sobic004G195800 Sobic002G257100 Sobic002G257100 Sobic008G142100--Sobic002G257100 Sobic001G381300 Sobic001G381300 Sobic008G142100--Sobic001G381300 Sobic001G339600 Sobic001G339600 Sobic008G142100--Sobic001G339600 Sobic003G339900 Sobic003G339900 Sobic008G142100--Sobic003G339900 Sobic010G045000--Sobic003G291700 Sobic006G229500 Sobic006G229500 Sobic010G045000--Sobic006G229500 Sobic005G193600 Sobic005G193600 Sobic010G045000--Sobic005G193600 Sobic010G045000--Sobic009G252100 Sobic008G060200 Sobic008G060200 Sobic010G045000--Sobic008G060200 Sobic008G060300 Sobic008G060300 Sobic010G045000--Sobic008G060300 Sobic010G045000--Sobic005G171100 Sobic006G003700 Sobic006G003700 Sobic010G045000--Sobic006G003700 Sobic010G045000--Sobic001G381300 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic003G031100--Sobic008G146700 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic001G319100--Sobic006G246200 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G319100--Sobic001G381300
Octagon: transcription factors


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