Gene annotation
Transcriptome id Sobic.005G036700.3,Sobic.005G036700.2
Synonym Sb05g003080
Functional annotation expressed protein
UniProt A0A1Z5RGL9 , A0A1Z5RHH7
Pfam -
Panther DB PTHR36045 PTHR36045:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g47130.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
3 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
4 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
5 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
6 Sobic.004G291800 - -
7 Sobic.004G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
8 Sobic.001G377000 auxin-repressed protein, putative, expressed -
9 Sobic.004G020401 - -
10 Sobic.010G280100 expressed protein -
11 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
12 Sobic.004G083700 expressed protein -
13 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
14 Sobic.004G241500 expressed protein -
15 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
16 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
17 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.006G191400 - -
19 Sobic.010G143200 - -
20 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7


Gene co-expression network
sample Sobic005G036700 Sobic005G036700 Sobic007G130100 Sobic007G130100 Sobic005G036700--Sobic007G130100 Sobic009G198900 Sobic009G198900 Sobic005G036700--Sobic009G198900 Sobic004G211400 Sobic004G211400 Sobic005G036700--Sobic004G211400 Sobic004G113800 Sobic004G113800 Sobic005G036700--Sobic004G113800 Sobic003G324000 Sobic003G324000 Sobic005G036700--Sobic003G324000 Sobic004G291800 Sobic004G291800 Sobic005G036700--Sobic004G291800 Sobic004G122500 Sobic004G122500 Sobic005G036700--Sobic004G122500 Sobic001G377000 Sobic001G377000 Sobic005G036700--Sobic001G377000 Sobic004G020401 Sobic004G020401 Sobic005G036700--Sobic004G020401 Sobic007G130100--Sobic004G020401 Sobic004G315800 Sobic004G315800 Sobic007G130100--Sobic004G315800 Sobic007G130100--Sobic004G291800 Sobic007G130100--Sobic003G324000 Sobic010G280100 Sobic010G280100 Sobic007G130100--Sobic010G280100 Sobic007G130100--Sobic009G198900 Sobic003G057800 Sobic003G057800 Sobic007G130100--Sobic003G057800 Sobic006G048775 Sobic006G048775 Sobic007G130100--Sobic006G048775 Sobic009G110366 Sobic009G110366 Sobic007G130100--Sobic009G110366 Sobic009G198900--Sobic003G324000 Sobic009G087800 Sobic009G087800 Sobic009G198900--Sobic009G087800 Sobic009G198900--Sobic010G280100 Sobic003G258400 Sobic003G258400 Sobic009G198900--Sobic003G258400 Sobic005G187200 Sobic005G187200 Sobic009G198900--Sobic005G187200 Sobic007G054000 Sobic007G054000 Sobic009G198900--Sobic007G054000 Sobic009G198900--Sobic009G110366 Sobic007G205800 Sobic007G205800 Sobic009G198900--Sobic007G205800 Sobic006G196000 Sobic006G196000 Sobic009G198900--Sobic006G196000 Sobic008G034600 Sobic008G034600 Sobic004G211400--Sobic008G034600 Sobic009G022200 Sobic009G022200 Sobic004G211400--Sobic009G022200 Sobic004G211400--Sobic007G205800 Sobic002G157200 Sobic002G157200 Sobic004G211400--Sobic002G157200 Sobic007G224900 Sobic007G224900 Sobic004G211400--Sobic007G224900 Sobic006G191400 Sobic006G191400 Sobic004G211400--Sobic006G191400 Sobic004G211400--Sobic003G258400 Sobic008G136200 Sobic008G136200 Sobic004G211400--Sobic008G136200 Sobic001G428400 Sobic001G428400 Sobic004G211400--Sobic001G428400 Sobic010G056200 Sobic010G056200 Sobic004G113800--Sobic010G056200 Sobic007G052900 Sobic007G052900 Sobic004G113800--Sobic007G052900 Sobic009G140500 Sobic009G140500 Sobic004G113800--Sobic009G140500 Sobic001G368400 Sobic001G368400 Sobic004G113800--Sobic001G368400 Sobic001G118100 Sobic001G118100 Sobic004G113800--Sobic001G118100 Sobic009G034200 Sobic009G034200 Sobic004G113800--Sobic009G034200 Sobic004G241500 Sobic004G241500 Sobic004G113800--Sobic004G241500 Sobic004G174400 Sobic004G174400 Sobic004G113800--Sobic004G174400 Sobic004G113800--Sobic003G324000 Sobic003G324000--Sobic009G198900 Sobic003G324000--Sobic001G368400 Sobic003G324000--Sobic005G187200 Sobic003G324000--Sobic010G056200 Sobic001G479500 Sobic001G479500 Sobic003G324000--Sobic001G479500 Sobic003G324000--Sobic010G280100 Sobic003G324000--Sobic007G205800 Sobic003G324000--Sobic009G087800 Sobic003G324000--Sobic003G258400 Sobic004G291800--Sobic004G020401 Sobic009G197200 Sobic009G197200 Sobic004G291800--Sobic009G197200 Sobic004G291800--Sobic009G110366 Sobic002G212800 Sobic002G212800 Sobic004G291800--Sobic002G212800 Sobic007G112900 Sobic007G112900 Sobic004G291800--Sobic007G112900 Sobic009G109450 Sobic009G109450 Sobic004G291800--Sobic009G109450 Sobic004G291800--Sobic007G130100 Sobic006G273100 Sobic006G273100 Sobic004G291800--Sobic006G273100 Sobic004G291800--Sobic003G057800 Sobic004G122500--Sobic005G036700 Sobic004G122500--Sobic009G198900 Sobic004G122500--Sobic004G020401 Sobic004G122500--Sobic004G291800 Sobic006G180432 Sobic006G180432 Sobic004G122500--Sobic006G180432 Sobic009G180200 Sobic009G180200 Sobic004G122500--Sobic009G180200 Sobic008G105900 Sobic008G105900 Sobic004G122500--Sobic008G105900 Sobic001G497200 Sobic001G497200 Sobic004G122500--Sobic001G497200 Sobic006G204200 Sobic006G204200 Sobic004G122500--Sobic006G204200 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic009G213400 Sobic009G213400 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901 Sobic004G020401--Sobic004G291800 Sobic004G020401--Sobic009G110366 Sobic004G020401--Sobic009G109450 Sobic004G020401--Sobic009G197200 Sobic004G020401--Sobic003G057800 Sobic004G020401--Sobic007G130100 Sobic004G020401--Sobic001G479500 Sobic003G357500 Sobic003G357500 Sobic004G020401--Sobic003G357500 Sobic008G161401 Sobic008G161401 Sobic004G020401--Sobic008G161401
Octagon: transcription factors


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