Gene annotation
Transcriptome id Sobic.009G166801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R2Z9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g38940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G159700 expressed protein -
2 Sobic.009G030100 expressed protein -
3 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
4 Sobic.010G110700 Acyl activating enzyme 5 AAE5 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed -
5 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
6 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
7 Sobic.002G338300 expressed protein -
8 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
10 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
11 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G028800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
15 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G516500 expansin precursor, putative, expressed -
18 Sobic.006G194300 DUF581 domain containing protein, expressed -
19 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
20 Sobic.006G241300 expressed protein -


Gene co-expression network
sample Sobic009G166801 Sobic009G166801 Sobic009G159700 Sobic009G159700 Sobic009G166801--Sobic009G159700 Sobic009G030100 Sobic009G030100 Sobic009G166801--Sobic009G030100 Sobic004G285800 Sobic004G285800 Sobic009G166801--Sobic004G285800 Sobic010G110700 Sobic010G110700 Sobic009G166801--Sobic010G110700 Sobic001G341300 Sobic001G341300 Sobic009G166801--Sobic001G341300 Sobic003G293900 Sobic003G293900 Sobic009G166801--Sobic003G293900 Sobic002G338300 Sobic002G338300 Sobic009G166801--Sobic002G338300 Sobic005G085600 Sobic005G085600 Sobic009G166801--Sobic005G085600 Sobic006G269200 Sobic006G269200 Sobic009G166801--Sobic006G269200 Sobic005G085200 Sobic005G085200 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G159700--Sobic009G166801 Sobic010G057300 Sobic010G057300 Sobic009G159700--Sobic010G057300 Sobic007G189800 Sobic007G189800 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic004G345900 Sobic004G345900 Sobic009G159700--Sobic004G345900 Sobic010G057400 Sobic010G057400 Sobic009G159700--Sobic010G057400 Sobic009G030100--Sobic006G269200 Sobic009G030100--Sobic003G293900 Sobic004G157300 Sobic004G157300 Sobic009G030100--Sobic004G157300 Sobic009G030100--Sobic009G166801 Sobic003G418000 Sobic003G418000 Sobic009G030100--Sobic003G418000 Sobic007G002200 Sobic007G002200 Sobic009G030100--Sobic007G002200 Sobic009G030100--Sobic010G110700 Sobic009G030100--Sobic002G338300 Sobic009G064000 Sobic009G064000 Sobic009G030100--Sobic009G064000 Sobic004G285800--Sobic010G057300 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic009G180100 Sobic009G180100 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic010G110700--Sobic009G030100 Sobic010G110700--Sobic009G166801 Sobic010G110700--Sobic004G285800 Sobic010G110700--Sobic010G057300 Sobic010G110700--Sobic009G159700 Sobic010G110700--Sobic003G293900 Sobic010G110700--Sobic001G379600 Sobic010G110700--Sobic002G338300 Sobic010G110700--Sobic009G180100 Sobic002G376400 Sobic002G376400 Sobic001G341300--Sobic002G376400 Sobic006G159400 Sobic006G159400 Sobic001G341300--Sobic006G159400 Sobic004G216700 Sobic004G216700 Sobic001G341300--Sobic004G216700 Sobic001G341300--Sobic009G159700 Sobic008G185900 Sobic008G185900 Sobic001G341300--Sobic008G185900 Sobic001G341300--Sobic009G166801 Sobic001G253600 Sobic001G253600 Sobic001G341300--Sobic001G253600 Sobic001G516500 Sobic001G516500 Sobic001G341300--Sobic001G516500 Sobic005G172300 Sobic005G172300 Sobic001G341300--Sobic005G172300 Sobic003G296600 Sobic003G296600 Sobic003G293900--Sobic003G296600 Sobic003G293900--Sobic009G030100 Sobic001G032100 Sobic001G032100 Sobic003G293900--Sobic001G032100 Sobic006G194150 Sobic006G194150 Sobic003G293900--Sobic006G194150 Sobic002G421600 Sobic002G421600 Sobic003G293900--Sobic002G421600 Sobic001G247400 Sobic001G247400 Sobic003G293900--Sobic001G247400 Sobic002G330700 Sobic002G330700 Sobic003G293900--Sobic002G330700 Sobic001G311000 Sobic001G311000 Sobic003G293900--Sobic001G311000 Sobic007G126100 Sobic007G126100 Sobic003G293900--Sobic007G126100 Sobic009G100800 Sobic009G100800 Sobic002G338300--Sobic009G100800 Sobic002G338300--Sobic006G269200 Sobic002G338300--Sobic009G030100 Sobic002G338300--Sobic009G064000 Sobic003G013600 Sobic003G013600 Sobic002G338300--Sobic003G013600 Sobic002G338300--Sobic009G166801 Sobic006G047000 Sobic006G047000 Sobic002G338300--Sobic006G047000 Sobic009G080200 Sobic009G080200 Sobic002G338300--Sobic009G080200 Sobic002G338300--Sobic008G185900 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic004G199600 Sobic004G199600 Sobic005G085600--Sobic004G199600 Sobic009G078500 Sobic009G078500 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic002G254200 Sobic002G254200 Sobic006G269200--Sobic002G254200 Sobic006G269200--Sobic009G030100 Sobic006G269200--Sobic002G421600 Sobic006G269200--Sobic009G064000 Sobic001G225200 Sobic001G225200 Sobic006G269200--Sobic001G225200 Sobic010G030401 Sobic010G030401 Sobic006G269200--Sobic010G030401 Sobic001G225300 Sobic001G225300 Sobic006G269200--Sobic001G225300 Sobic007G177100 Sobic007G177100 Sobic006G269200--Sobic007G177100 Sobic006G269200--Sobic007G126100
Octagon: transcription factors


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