Gene annotation
Transcriptome id Sobic.010G110700.1
Synonym AAE5, Sb10g009610
Functional annotation Acyl activating enzyme 5 AAE5 (At) (PubMedID : 27208977)
AMP-binding enzyme, putative, expressed
UniProt C5Z8E3
Pfam PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G16370 : acyl activating enzyme 5
RAP-DB (Rice) LOC_Os04g57850.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a009318 , Zm00025a042696 , Zm00025a053468
Brachypodium KQJ85265
Barley HORVU2Hr1G120190.4 , HORVU2Hr1G120190.3 , HORVU2Hr1G120190.2 , HORVU2Hr1G120190.1 , HORVU2Hr1G120150.9 , HORVU2Hr1G120150.8 , HORVU2Hr1G120150.3 , HORVU2Hr1G120150.2 , HORVU2Hr1G120150.1 , HORVU2Hr1G120150.7 , HORVU2Hr1G120150.6 , HORVU2Hr1G120150.5 , HORVU2Hr1G120150.4
Wheat TraesCS2D02G556500 , TraesCS2D02G557900 , TraesCS2A02G557100 , TraesCS2A02G556900 , TraesCS2D02G556600 , TraesCS2B02G587100 , TraesCS5D02G314500 , TraesCS2D02G556000 , TraesCS2D02G556100 , TraesCS5A02G307500 , TraesCS2B02G586300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G030100 expressed protein -
2 Sobic.009G166801 - -
3 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
4 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
5 Sobic.009G159700 expressed protein -
6 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
7 Sobic.001G379600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
8 Sobic.002G338300 expressed protein -
9 Sobic.009G180100 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
12 Sobic.002G330700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
13 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G406800 asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
16 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
17 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
18 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
19 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
20 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8


Gene co-expression network
sample Sobic010G110700 Sobic010G110700 Sobic009G030100 Sobic009G030100 Sobic010G110700--Sobic009G030100 Sobic009G166801 Sobic009G166801 Sobic010G110700--Sobic009G166801 Sobic004G285800 Sobic004G285800 Sobic010G110700--Sobic004G285800 Sobic010G057300 Sobic010G057300 Sobic010G110700--Sobic010G057300 Sobic009G159700 Sobic009G159700 Sobic010G110700--Sobic009G159700 Sobic003G293900 Sobic003G293900 Sobic010G110700--Sobic003G293900 Sobic001G379600 Sobic001G379600 Sobic010G110700--Sobic001G379600 Sobic002G338300 Sobic002G338300 Sobic010G110700--Sobic002G338300 Sobic009G180100 Sobic009G180100 Sobic010G110700--Sobic009G180100 Sobic006G269200 Sobic006G269200 Sobic009G030100--Sobic006G269200 Sobic009G030100--Sobic003G293900 Sobic004G157300 Sobic004G157300 Sobic009G030100--Sobic004G157300 Sobic009G030100--Sobic009G166801 Sobic003G418000 Sobic003G418000 Sobic009G030100--Sobic003G418000 Sobic007G002200 Sobic007G002200 Sobic009G030100--Sobic007G002200 Sobic009G030100--Sobic010G110700 Sobic009G030100--Sobic002G338300 Sobic009G064000 Sobic009G064000 Sobic009G030100--Sobic009G064000 Sobic009G166801--Sobic009G159700 Sobic009G166801--Sobic009G030100 Sobic009G166801--Sobic004G285800 Sobic009G166801--Sobic010G110700 Sobic001G341300 Sobic001G341300 Sobic009G166801--Sobic001G341300 Sobic009G166801--Sobic003G293900 Sobic009G166801--Sobic002G338300 Sobic005G085600 Sobic005G085600 Sobic009G166801--Sobic005G085600 Sobic009G166801--Sobic006G269200 Sobic004G285800--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic004G285800--Sobic001G379600 Sobic010G057400 Sobic010G057400 Sobic004G285800--Sobic010G057400 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic004G345900 Sobic004G345900 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic004G199600 Sobic004G199600 Sobic010G057300--Sobic004G199600 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic007G189800 Sobic007G189800 Sobic010G057300--Sobic007G189800 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400 Sobic003G296600 Sobic003G296600 Sobic003G293900--Sobic003G296600 Sobic003G293900--Sobic009G030100 Sobic001G032100 Sobic001G032100 Sobic003G293900--Sobic001G032100 Sobic006G194150 Sobic006G194150 Sobic003G293900--Sobic006G194150 Sobic002G421600 Sobic002G421600 Sobic003G293900--Sobic002G421600 Sobic001G247400 Sobic001G247400 Sobic003G293900--Sobic001G247400 Sobic002G330700 Sobic002G330700 Sobic003G293900--Sobic002G330700 Sobic001G311000 Sobic001G311000 Sobic003G293900--Sobic001G311000 Sobic007G126100 Sobic007G126100 Sobic003G293900--Sobic007G126100 Sobic001G379600--Sobic009G180100 Sobic001G379600--Sobic004G285800 Sobic001G379600--Sobic010G057300 Sobic002G188500 Sobic002G188500 Sobic001G379600--Sobic002G188500 Sobic001G379600--Sobic010G057400 Sobic004G315100 Sobic004G315100 Sobic001G379600--Sobic004G315100 Sobic001G379600--Sobic010G110700 Sobic001G379600--Sobic004G345900 Sobic001G379600--Sobic009G159700 Sobic009G100800 Sobic009G100800 Sobic002G338300--Sobic009G100800 Sobic002G338300--Sobic006G269200 Sobic002G338300--Sobic009G030100 Sobic002G338300--Sobic009G064000 Sobic003G013600 Sobic003G013600 Sobic002G338300--Sobic003G013600 Sobic002G338300--Sobic009G166801 Sobic006G047000 Sobic006G047000 Sobic002G338300--Sobic006G047000 Sobic009G080200 Sobic009G080200 Sobic002G338300--Sobic009G080200 Sobic008G185900 Sobic008G185900 Sobic002G338300--Sobic008G185900 Sobic009G180100--Sobic010G057300 Sobic009G180100--Sobic001G379600 Sobic009G180100--Sobic010G057400 Sobic009G180100--Sobic004G345900 Sobic009G180100--Sobic004G285800 Sobic009G180100--Sobic010G270300 Sobic009G180100--Sobic005G085200 Sobic009G180100--Sobic004G199600 Sobic005G130100 Sobic005G130100 Sobic009G180100--Sobic005G130100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.