Gene annotation
Transcriptome id Sobic.001G406800.1,Sobic.001G406800.3,Sobic.001G406800.2
Synonym AT-ASN1, DIN6, ASN1, Sb01g038460
Functional annotation asparagine synthetase, putative, expressed
UniProt A0A1B6QNT6 , A0A1B6QNU8 , A0A1B6QNT7
Pfam PF13522 PF00733 PF12481 PF00733
Panther DB PTHR11772 PTHR11772:SF16
NCBI CDD -
KEGG Orthology K01953; asnB, asparagine synthase (glutamine-hydrolysing)
Gene Ontology GO:0006529; asparagine biosynthetic process GO:0004066asparagine synthase (glutamine-hydrolyzing) activity


Orthologs (automatic annotation)
TAIR AT3G47340 : asparagine synthetase 2,glutamine-dependent asparagine synthase 1
RAP-DB (Rice) LOC_Os03g18130.4,LOC_Os03g18130.1 : asparagine synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a001986 , Zm00025a052657
Brachypodium KQK22161
Barley HORVU4Hr1G056240.13 , HORVU4Hr1G056240.12 , HORVU4Hr1G056240.11 , HORVU4Hr1G056240.10 , HORVU4Hr1G056240.17 , HORVU4Hr1G056240.16 , HORVU4Hr1G056240.15 , HORVU4Hr1G056240.14 , HORVU4Hr1G056240.19 , HORVU4Hr1G056240.18 , HORVU4Hr1G056240.22 , HORVU4Hr1G056240.20 , HORVU4Hr1G056240.21 , HORVU4Hr1G056240.3 , HORVU4Hr1G056240.2 , HORVU4Hr1G056240.1 , HORVU4Hr1G056240.7 , HORVU4Hr1G056240.6 , HORVU4Hr1G056240.5 , HORVU4Hr1G056240.4 , HORVU4Hr1G056240.9 , HORVU4Hr1G056240.8
Wheat TraesCS4B02G194400 , TraesCS4B02G194400 , TraesCS4A02G109900 , TraesCS4D02G195100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148700 powdery mildew resistant protein 5, putative, expressed -
2 Sobic.004G161301 - -
3 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
4 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
5 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
6 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
7 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
8 Sobic.004G157300 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
9 Sobic.009G030100 expressed protein -
10 Sobic.005G003200 sugar-responsive gene(PubMedID : 25496467)@asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
11 Sobic.006G249000 cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
12 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
13 Sobic.010G110700 Acyl activating enzyme 5 AAE5 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed -
14 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
15 Sobic.009G180100 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
16 Sobic.003G397300 - -
17 Sobic.009G166801 - -
18 Sobic.001G516500 expansin precursor, putative, expressed -
19 Sobic.002G051300 flavin-containing monooxygenase family protein, putative, expressed -
20 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase


Gene co-expression network
sample Sobic001G406800 Sobic001G406800 Sobic003G148700 Sobic003G148700 Sobic001G406800--Sobic003G148700 Sobic004G161301 Sobic004G161301 Sobic001G406800--Sobic004G161301 Sobic006G098200 Sobic006G098200 Sobic001G406800--Sobic006G098200 Sobic009G235900 Sobic009G235900 Sobic001G406800--Sobic009G235900 Sobic004G221900 Sobic004G221900 Sobic001G406800--Sobic004G221900 Sobic010G057300 Sobic010G057300 Sobic001G406800--Sobic010G057300 Sobic004G285800 Sobic004G285800 Sobic001G406800--Sobic004G285800 Sobic004G157300 Sobic004G157300 Sobic001G406800--Sobic004G157300 Sobic009G030100 Sobic009G030100 Sobic001G406800--Sobic009G030100 Sobic007G189800 Sobic007G189800 Sobic003G148700--Sobic007G189800 Sobic006G249000 Sobic006G249000 Sobic003G148700--Sobic006G249000 Sobic003G400266 Sobic003G400266 Sobic003G148700--Sobic003G400266 Sobic005G003200 Sobic005G003200 Sobic003G148700--Sobic005G003200 Sobic001G277000 Sobic001G277000 Sobic003G148700--Sobic001G277000 Sobic003G148700--Sobic001G406800 Sobic007G144400 Sobic007G144400 Sobic003G148700--Sobic007G144400 Sobic009G231300 Sobic009G231300 Sobic004G161301--Sobic009G231300 Sobic006G194150 Sobic006G194150 Sobic004G161301--Sobic006G194150 Sobic004G256600 Sobic004G256600 Sobic004G161301--Sobic004G256600 Sobic003G258400 Sobic003G258400 Sobic004G161301--Sobic003G258400 Sobic004G161301--Sobic005G003200 Sobic001G363100 Sobic001G363100 Sobic004G161301--Sobic001G363100 Sobic001G347600 Sobic001G347600 Sobic004G161301--Sobic001G347600 Sobic009G180200 Sobic009G180200 Sobic004G161301--Sobic009G180200 Sobic007G156500 Sobic007G156500 Sobic004G161301--Sobic007G156500 Sobic006G033700 Sobic006G033700 Sobic006G098200--Sobic006G033700 Sobic006G130501 Sobic006G130501 Sobic006G098200--Sobic006G130501 Sobic003G154700 Sobic003G154700 Sobic006G098200--Sobic003G154700 Sobic006G098200--Sobic001G347600 Sobic001G359400 Sobic001G359400 Sobic006G098200--Sobic001G359400 Sobic001G467000 Sobic001G467000 Sobic006G098200--Sobic001G467000 Sobic002G301500 Sobic002G301500 Sobic006G098200--Sobic002G301500 Sobic007G191100 Sobic007G191100 Sobic006G098200--Sobic007G191100 Sobic010G274500 Sobic010G274500 Sobic006G098200--Sobic010G274500 Sobic001G194900 Sobic001G194900 Sobic009G235900--Sobic001G194900 Sobic002G188500 Sobic002G188500 Sobic009G235900--Sobic002G188500 Sobic008G160700 Sobic008G160700 Sobic009G235900--Sobic008G160700 Sobic009G235900--Sobic001G359400 Sobic005G007800 Sobic005G007800 Sobic009G235900--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic009G235900--Sobic010G042900 Sobic003G005800 Sobic003G005800 Sobic009G235900--Sobic003G005800 Sobic003G145900 Sobic003G145900 Sobic009G235900--Sobic003G145900 Sobic009G235900--Sobic001G347600 Sobic007G023700 Sobic007G023700 Sobic004G221900--Sobic007G023700 Sobic004G221900--Sobic001G363100 Sobic004G221900--Sobic009G180200 Sobic004G221900--Sobic007G156500 Sobic003G296600 Sobic003G296600 Sobic004G221900--Sobic003G296600 Sobic002G108800 Sobic002G108800 Sobic004G221900--Sobic002G108800 Sobic006G184300 Sobic006G184300 Sobic004G221900--Sobic006G184300 Sobic001G032100 Sobic001G032100 Sobic004G221900--Sobic001G032100 Sobic002G039500 Sobic002G039500 Sobic004G221900--Sobic002G039500 Sobic005G085200 Sobic005G085200 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic004G345900 Sobic004G345900 Sobic010G057300--Sobic004G345900 Sobic010G057400 Sobic010G057400 Sobic010G057300--Sobic010G057400 Sobic004G199600 Sobic004G199600 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic005G085600 Sobic005G085600 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic004G285800--Sobic010G057300 Sobic004G285800--Sobic005G085200 Sobic009G159700 Sobic009G159700 Sobic004G285800--Sobic009G159700 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic004G285800--Sobic009G180100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic004G157300--Sobic009G030100 Sobic003G293900 Sobic003G293900 Sobic004G157300--Sobic003G293900 Sobic001G056700 Sobic001G056700 Sobic004G157300--Sobic001G056700 Sobic004G164500 Sobic004G164500 Sobic004G157300--Sobic004G164500 Sobic001G516500 Sobic001G516500 Sobic004G157300--Sobic001G516500 Sobic006G241300 Sobic006G241300 Sobic004G157300--Sobic006G241300 Sobic001G471900 Sobic001G471900 Sobic004G157300--Sobic001G471900 Sobic004G157300--Sobic003G296600 Sobic004G157300--Sobic006G194150 Sobic006G269200 Sobic006G269200 Sobic009G030100--Sobic006G269200 Sobic009G030100--Sobic003G293900 Sobic009G030100--Sobic004G157300 Sobic009G166801 Sobic009G166801 Sobic009G030100--Sobic009G166801 Sobic003G418000 Sobic003G418000 Sobic009G030100--Sobic003G418000 Sobic007G002200 Sobic007G002200 Sobic009G030100--Sobic007G002200 Sobic010G110700 Sobic010G110700 Sobic009G030100--Sobic010G110700 Sobic002G338300 Sobic002G338300 Sobic009G030100--Sobic002G338300 Sobic009G064000 Sobic009G064000 Sobic009G030100--Sobic009G064000
Octagon: transcription factors


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