Gene annotation
Transcriptome id Sobic.001G254400.1
Synonym Sb01g022480
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized oxidoreductase, putative, expressed
UniProt C5WM97
Pfam PF01408
Panther DB PTHR22604 PTHR22604:SF132
NCBI CDD KOG2741; Dimeric dihydrodiol dehydrogenase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G09670 : Oxidoreductase family protein
RAP-DB (Rice) LOC_Os10g26400.2 : uncharacterized oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a007016 , Zm00025a017821
Brachypodium -
Barley HORVU1Hr1G085660.1 , HORVU1Hr1G085660.2
Wheat TraesCS3A02G177400 , TraesCS3D02G183400 , TraesCS1A02G389200 , TraesCS3B02G207600 , TraesCS1D02G396800 , TraesCS1B02G417000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G060900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed -
2 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
3 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.008G185900 RNA recognition motif containing protein, expressed -
5 Sobic.004G247800 SET domain-containing protein, putative, expressed -
6 Sobic.002G407800 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
7 Sobic.003G176200 - -
8 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
9 Sobic.001G141300 RNA recognition motif containing protein, expressed -
10 Sobic.006G241200 expressed protein -
11 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
12 Sobic.003G183900 pentatricopeptide, putative, expressed -
13 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
14 Sobic.006G158000 expressed protein -
15 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
16 Sobic.006G279800 expressed protein -
17 Sobic.008G013900 O-methyltransferase, putative, expressed -
18 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
19 Sobic.001G426400 expressed protein -
20 Sobic.007G210801 - K10277: KDM8, lysine-specific demethylase 8


Gene co-expression network
sample Sobic001G254400 Sobic001G254400 Sobic007G060900 Sobic007G060900 Sobic001G254400--Sobic007G060900 Sobic002G172600 Sobic002G172600 Sobic001G254400--Sobic002G172600 Sobic003G128000 Sobic003G128000 Sobic001G254400--Sobic003G128000 Sobic008G185900 Sobic008G185900 Sobic001G254400--Sobic008G185900 Sobic004G247800 Sobic004G247800 Sobic001G254400--Sobic004G247800 Sobic002G407800 Sobic002G407800 Sobic001G254400--Sobic002G407800 Sobic003G176200 Sobic003G176200 Sobic001G254400--Sobic003G176200 Sobic004G216700 Sobic004G216700 Sobic001G254400--Sobic004G216700 Sobic001G141300 Sobic001G141300 Sobic001G254400--Sobic001G141300 Sobic006G265400 Sobic006G265400 Sobic007G060900--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G060900--Sobic001G426400 Sobic007G060900--Sobic001G254400 Sobic004G070200 Sobic004G070200 Sobic007G060900--Sobic004G070200 Sobic007G060900--Sobic004G247800 Sobic009G197000 Sobic009G197000 Sobic007G060900--Sobic009G197000 Sobic007G060900--Sobic002G172600 Sobic007G182600 Sobic007G182600 Sobic007G060900--Sobic007G182600 Sobic010G270900 Sobic010G270900 Sobic007G060900--Sobic010G270900 Sobic002G172600--Sobic004G070200 Sobic002G172600--Sobic004G247800 Sobic010G143400 Sobic010G143400 Sobic002G172600--Sobic010G143400 Sobic006G271900 Sobic006G271900 Sobic002G172600--Sobic006G271900 Sobic001G437801 Sobic001G437801 Sobic002G172600--Sobic001G437801 Sobic002G172600--Sobic004G216700 Sobic007G131200 Sobic007G131200 Sobic002G172600--Sobic007G131200 Sobic002G172600--Sobic001G254400 Sobic001G040600 Sobic001G040600 Sobic002G172600--Sobic001G040600 Sobic001G392100 Sobic001G392100 Sobic003G128000--Sobic001G392100 Sobic009G155400 Sobic009G155400 Sobic003G128000--Sobic009G155400 Sobic001G009400 Sobic001G009400 Sobic003G128000--Sobic001G009400 Sobic008G163400 Sobic008G163400 Sobic003G128000--Sobic008G163400 Sobic004G217900 Sobic004G217900 Sobic003G128000--Sobic004G217900 Sobic001G149100 Sobic001G149100 Sobic003G128000--Sobic001G149100 Sobic003G239000 Sobic003G239000 Sobic003G128000--Sobic003G239000 Sobic001G347100 Sobic001G347100 Sobic003G128000--Sobic001G347100 Sobic003G128000--Sobic001G254400 Sobic008G185900--Sobic001G141300 Sobic003G401400 Sobic003G401400 Sobic008G185900--Sobic003G401400 Sobic001G341300 Sobic001G341300 Sobic008G185900--Sobic001G341300 Sobic002G376400 Sobic002G376400 Sobic008G185900--Sobic002G376400 Sobic008G133500 Sobic008G133500 Sobic008G185900--Sobic008G133500 Sobic002G279100 Sobic002G279100 Sobic008G185900--Sobic002G279100 Sobic008G185900--Sobic004G216700 Sobic008G171800 Sobic008G171800 Sobic008G185900--Sobic008G171800 Sobic006G241200 Sobic006G241200 Sobic008G185900--Sobic006G241200 Sobic004G247800--Sobic002G172600 Sobic004G247800--Sobic004G070200 Sobic007G116100 Sobic007G116100 Sobic004G247800--Sobic007G116100 Sobic006G263800 Sobic006G263800 Sobic004G247800--Sobic006G263800 Sobic001G542800 Sobic001G542800 Sobic004G247800--Sobic001G542800 Sobic001G228300 Sobic001G228300 Sobic004G247800--Sobic001G228300 Sobic008G021700 Sobic008G021700 Sobic004G247800--Sobic008G021700 Sobic006G095800 Sobic006G095800 Sobic004G247800--Sobic006G095800 Sobic002G191100 Sobic002G191100 Sobic004G247800--Sobic002G191100 Sobic010G099300 Sobic010G099300 Sobic002G407800--Sobic010G099300 Sobic002G407800--Sobic001G040600 Sobic002G407800--Sobic001G254400 Sobic003G051500 Sobic003G051500 Sobic002G407800--Sobic003G051500 Sobic001G395300 Sobic001G395300 Sobic002G407800--Sobic001G395300 Sobic001G081300 Sobic001G081300 Sobic002G407800--Sobic001G081300 Sobic002G389200 Sobic002G389200 Sobic002G407800--Sobic002G389200 Sobic002G407800--Sobic007G182600 Sobic008G056900 Sobic008G056900 Sobic002G407800--Sobic008G056900 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic007G123200 Sobic007G123200 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic008G008500 Sobic008G008500 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic004G216700--Sobic002G376400 Sobic005G085100 Sobic005G085100 Sobic004G216700--Sobic005G085100 Sobic004G216700--Sobic001G341300 Sobic001G480400 Sobic001G480400 Sobic004G216700--Sobic001G480400 Sobic004G216700--Sobic010G143400 Sobic009G159700 Sobic009G159700 Sobic004G216700--Sobic009G159700 Sobic004G216700--Sobic006G241200 Sobic008G013900 Sobic008G013900 Sobic004G216700--Sobic008G013900 Sobic007G189800 Sobic007G189800 Sobic004G216700--Sobic007G189800 Sobic001G141300--Sobic008G185900 Sobic001G141300--Sobic003G401400 Sobic001G141300--Sobic009G197000 Sobic001G141300--Sobic001G426400 Sobic001G191200 Sobic001G191200 Sobic001G141300--Sobic001G191200 Sobic001G141300--Sobic006G265400 Sobic006G279800 Sobic006G279800 Sobic001G141300--Sobic006G279800 Sobic001G423100 Sobic001G423100 Sobic001G141300--Sobic001G423100 Sobic001G078200 Sobic001G078200 Sobic001G141300--Sobic001G078200
Octagon: transcription factors


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