Gene annotation
Transcriptome id Sobic.007G060900.2,Sobic.007G060900.1
Synonym Sb07g004880
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
disease resistance protein RPM1, putative, expressed
UniProt A0A1B6PFW1 , A0A1B6PG64
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF537 PTHR23155 PTHR23155:SF578
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46730 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g07940.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT66679 , PNT66678 , PNT62409 , PNT62410
Barley -
Wheat TraesCS7B02G478300 , TraesCS1D02G090600 , TraesCSU02G172000 , TraesCSU02G172000 , TraesCS1A02G003100 , TraesCS1B02G108500 , TraesCS7A02G553700 , TraesCS1B02G108500 , TraesCSU02G000800 , TraesCSU02G172000 , TraesCSU02G000800 , TraesCSU02G000800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.001G426400 expressed protein -
3 Sobic.001G254400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
4 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
5 Sobic.004G247800 SET domain-containing protein, putative, expressed -
6 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
7 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
8 Sobic.007G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
9 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G262650 - -
11 Sobic.001G138000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thiamine biosynthesis protein thiC, putative, expressed K03147: phosphomethylpyrimidine synthase
12 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
13 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.003G051500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
15 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
17 Sobic.001G228300 SAP domain containing protein, expressed -
18 Sobic.001G437801 - K04077: groEL, chaperonin GroEL
19 Sobic.001G081300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.006G279800 expressed protein -


Gene co-expression network
sample Sobic007G060900 Sobic007G060900 Sobic006G265400 Sobic006G265400 Sobic007G060900--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G060900--Sobic001G426400 Sobic001G254400 Sobic001G254400 Sobic007G060900--Sobic001G254400 Sobic004G070200 Sobic004G070200 Sobic007G060900--Sobic004G070200 Sobic004G247800 Sobic004G247800 Sobic007G060900--Sobic004G247800 Sobic009G197000 Sobic009G197000 Sobic007G060900--Sobic009G197000 Sobic002G172600 Sobic002G172600 Sobic007G060900--Sobic002G172600 Sobic007G182600 Sobic007G182600 Sobic007G060900--Sobic007G182600 Sobic010G270900 Sobic010G270900 Sobic007G060900--Sobic010G270900 Sobic006G265400--Sobic001G426400 Sobic008G148400 Sobic008G148400 Sobic006G265400--Sobic008G148400 Sobic009G238100 Sobic009G238100 Sobic006G265400--Sobic009G238100 Sobic007G131200 Sobic007G131200 Sobic006G265400--Sobic007G131200 Sobic006G265400--Sobic007G060900 Sobic001G141300 Sobic001G141300 Sobic006G265400--Sobic001G141300 Sobic006G265400--Sobic009G197000 Sobic001G255400 Sobic001G255400 Sobic006G265400--Sobic001G255400 Sobic010G143400 Sobic010G143400 Sobic006G265400--Sobic010G143400 Sobic001G426400--Sobic006G265400 Sobic001G426400--Sobic008G148400 Sobic001G426400--Sobic009G238100 Sobic009G032100 Sobic009G032100 Sobic001G426400--Sobic009G032100 Sobic004G249500 Sobic004G249500 Sobic001G426400--Sobic004G249500 Sobic003G255100 Sobic003G255100 Sobic001G426400--Sobic003G255100 Sobic003G030400 Sobic003G030400 Sobic001G426400--Sobic003G030400 Sobic001G426400--Sobic007G060900 Sobic001G426400--Sobic007G131200 Sobic001G254400--Sobic007G060900 Sobic001G254400--Sobic002G172600 Sobic003G128000 Sobic003G128000 Sobic001G254400--Sobic003G128000 Sobic008G185900 Sobic008G185900 Sobic001G254400--Sobic008G185900 Sobic001G254400--Sobic004G247800 Sobic002G407800 Sobic002G407800 Sobic001G254400--Sobic002G407800 Sobic003G176200 Sobic003G176200 Sobic001G254400--Sobic003G176200 Sobic004G216700 Sobic004G216700 Sobic001G254400--Sobic004G216700 Sobic001G254400--Sobic001G141300 Sobic003G222600 Sobic003G222600 Sobic004G070200--Sobic003G222600 Sobic004G070200--Sobic003G030400 Sobic004G070200--Sobic007G131200 Sobic004G070200--Sobic002G172600 Sobic006G110200 Sobic006G110200 Sobic004G070200--Sobic006G110200 Sobic009G137000 Sobic009G137000 Sobic004G070200--Sobic009G137000 Sobic001G114400 Sobic001G114400 Sobic004G070200--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic004G070200--Sobic002G191100 Sobic001G246200 Sobic001G246200 Sobic004G070200--Sobic001G246200 Sobic004G247800--Sobic002G172600 Sobic004G247800--Sobic004G070200 Sobic007G116100 Sobic007G116100 Sobic004G247800--Sobic007G116100 Sobic006G263800 Sobic006G263800 Sobic004G247800--Sobic006G263800 Sobic001G542800 Sobic001G542800 Sobic004G247800--Sobic001G542800 Sobic001G228300 Sobic001G228300 Sobic004G247800--Sobic001G228300 Sobic008G021700 Sobic008G021700 Sobic004G247800--Sobic008G021700 Sobic006G095800 Sobic006G095800 Sobic004G247800--Sobic006G095800 Sobic004G247800--Sobic002G191100 Sobic009G197000--Sobic010G143400 Sobic005G085200 Sobic005G085200 Sobic009G197000--Sobic005G085200 Sobic008G013900 Sobic008G013900 Sobic009G197000--Sobic008G013900 Sobic004G345900 Sobic004G345900 Sobic009G197000--Sobic004G345900 Sobic001G191200 Sobic001G191200 Sobic009G197000--Sobic001G191200 Sobic002G331000 Sobic002G331000 Sobic009G197000--Sobic002G331000 Sobic009G197000--Sobic007G131200 Sobic009G197000--Sobic001G141300 Sobic003G406700 Sobic003G406700 Sobic009G197000--Sobic003G406700 Sobic002G172600--Sobic004G070200 Sobic002G172600--Sobic004G247800 Sobic002G172600--Sobic010G143400 Sobic006G271900 Sobic006G271900 Sobic002G172600--Sobic006G271900 Sobic001G437801 Sobic001G437801 Sobic002G172600--Sobic001G437801 Sobic002G172600--Sobic004G216700 Sobic002G172600--Sobic007G131200 Sobic002G172600--Sobic001G254400 Sobic001G040600 Sobic001G040600 Sobic002G172600--Sobic001G040600 Sobic008G100400 Sobic008G100400 Sobic007G182600--Sobic008G100400 Sobic010G099300 Sobic010G099300 Sobic007G182600--Sobic010G099300 Sobic001G061600 Sobic001G061600 Sobic007G182600--Sobic001G061600 Sobic001G081300 Sobic001G081300 Sobic007G182600--Sobic001G081300 Sobic007G182600--Sobic001G040600 Sobic008G147400 Sobic008G147400 Sobic007G182600--Sobic008G147400 Sobic003G051500 Sobic003G051500 Sobic007G182600--Sobic003G051500 Sobic010G252000 Sobic010G252000 Sobic007G182600--Sobic010G252000 Sobic002G380100 Sobic002G380100 Sobic007G182600--Sobic002G380100 Sobic006G241200 Sobic006G241200 Sobic010G270900--Sobic006G241200 Sobic002G074300 Sobic002G074300 Sobic010G270900--Sobic002G074300 Sobic010G270900--Sobic008G013900 Sobic010G270900--Sobic010G143400 Sobic008G015300 Sobic008G015300 Sobic010G270900--Sobic008G015300 Sobic001G164200 Sobic001G164200 Sobic010G270900--Sobic001G164200 Sobic010G270900--Sobic009G197000 Sobic004G011566 Sobic004G011566 Sobic010G270900--Sobic004G011566 Sobic010G270900--Sobic005G085200
Octagon: transcription factors


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