Gene annotation
Transcriptome id Sobic.003G055500.1
Synonym Sb03g004750
Functional annotation transporter-related, putative, expressed
UniProt A0A1B6Q1I4
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF98
NCBI CDD KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
KEGG Orthology K15285; solute carrier family 35, member E3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06890 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os01g07310.1 : transporter-related, putative, expressed
MaizeGDB (Corn) Zm00025a042892 , Zm00025a035695 , Zm00025a023312
Brachypodium KQK02855 , KQK02856
Barley HORVU1Hr1G024660.1 , HORVU1Hr1G024660.3 , HORVU1Hr1G024660.2 , HORVU3Hr1G017560.10 , HORVU3Hr1G017560.11 , HORVU3Hr1G017560.12 , HORVU3Hr1G017560.13 , HORVU3Hr1G017560.8 , HORVU3Hr1G017560.9 , HORVU3Hr1G017560.6 , HORVU3Hr1G017560.7 , HORVU3Hr1G017560.4 , HORVU3Hr1G017560.5 , HORVU3Hr1G017560.2 , HORVU3Hr1G017560.3 , HORVU3Hr1G017560.1
Wheat TraesCS3A02G097100 , TraesCS3A02G097100 , TraesCS1A02G112100 , TraesCS1A02G112100 , TraesCS3B02G112800 , TraesCS3D02G097600 , TraesCS3D02G097600
Populus -


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cDNA sequences
Sobic.003G055500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
2 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
3 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
4 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
5 Sobic.010G267900 expressed protein -
6 Sobic.002G406200 expressed protein -
7 Sobic.006G150600 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
8 Sobic.010G065400 X0001, putative, expressed -
9 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
10 Sobic.010G039800 expressed protein -
11 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
12 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
13 Sobic.007G030700 transporter, putative, expressed -
14 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
15 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
16 Sobic.001G483100 peptidase, T1 family, putative, expressed K02730: 20S proteasome subunit alpha 1
17 Sobic.007G226100 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
18 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
19 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
20 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3


Gene co-expression network
sample Sobic003G055500 Sobic003G055500 Sobic001G529000 Sobic001G529000 Sobic003G055500--Sobic001G529000 Sobic005G157200 Sobic005G157200 Sobic003G055500--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic003G055500--Sobic008G058300 Sobic005G111100 Sobic005G111100 Sobic003G055500--Sobic005G111100 Sobic010G267900 Sobic010G267900 Sobic003G055500--Sobic010G267900 Sobic002G406200 Sobic002G406200 Sobic003G055500--Sobic002G406200 Sobic006G150600 Sobic006G150600 Sobic003G055500--Sobic006G150600 Sobic010G065400 Sobic010G065400 Sobic003G055500--Sobic010G065400 Sobic002G406500 Sobic002G406500 Sobic003G055500--Sobic002G406500 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic001G377800 Sobic001G377800 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic005G157200--Sobic002G406500 Sobic005G157200--Sobic007G163700 Sobic010G029400 Sobic010G029400 Sobic005G157200--Sobic010G029400 Sobic004G107600 Sobic004G107600 Sobic005G157200--Sobic004G107600 Sobic005G157200--Sobic001G529000 Sobic008G058300--Sobic005G157200 Sobic008G058300--Sobic003G025200 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic008G058300--Sobic004G300900 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800 Sobic001G128400 Sobic001G128400 Sobic005G111100--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic004G066800 Sobic004G066800 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic007G152400 Sobic007G152400 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic006G231700 Sobic006G231700 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic010G267900--Sobic007G163700 Sobic010G267900--Sobic006G231700 Sobic010G267900--Sobic001G529000 Sobic010G267900--Sobic003G055500 Sobic010G267900--Sobic006G052400 Sobic010G267900--Sobic005G111100 Sobic010G267900--Sobic003G129800 Sobic010G267900--Sobic004G066800 Sobic010G267900--Sobic008G058300 Sobic002G406200--Sobic003G055500 Sobic001G005900 Sobic001G005900 Sobic002G406200--Sobic001G005900 Sobic002G406200--Sobic008G058300 Sobic004G216800 Sobic004G216800 Sobic002G406200--Sobic004G216800 Sobic002G406200--Sobic003G124800 Sobic009G050200 Sobic009G050200 Sobic002G406200--Sobic009G050200 Sobic001G502200 Sobic001G502200 Sobic002G406200--Sobic001G502200 Sobic008G073300 Sobic008G073300 Sobic002G406200--Sobic008G073300 Sobic002G406200--Sobic001G331900 Sobic006G150600--Sobic003G124800 Sobic001G294000 Sobic001G294000 Sobic006G150600--Sobic001G294000 Sobic007G030700 Sobic007G030700 Sobic006G150600--Sobic007G030700 Sobic006G150600--Sobic001G529000 Sobic009G198500 Sobic009G198500 Sobic006G150600--Sobic009G198500 Sobic003G329800 Sobic003G329800 Sobic006G150600--Sobic003G329800 Sobic006G150600--Sobic008G058300 Sobic006G150600--Sobic003G362400 Sobic008G132800 Sobic008G132800 Sobic006G150600--Sobic008G132800 Sobic010G065400--Sobic002G078400 Sobic008G127500 Sobic008G127500 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic004G196300 Sobic004G196300 Sobic010G065400--Sobic004G196300 Sobic010G065400--Sobic003G362400 Sobic010G065400--Sobic005G111100 Sobic010G065400--Sobic009G198500 Sobic001G085400 Sobic001G085400 Sobic002G406500--Sobic001G085400 Sobic002G406500--Sobic001G377800 Sobic001G436200 Sobic001G436200 Sobic002G406500--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic002G406500--Sobic002G056200 Sobic006G138100 Sobic006G138100 Sobic002G406500--Sobic006G138100 Sobic002G115000 Sobic002G115000 Sobic002G406500--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic002G406500--Sobic002G049300 Sobic002G047600 Sobic002G047600 Sobic002G406500--Sobic002G047600 Sobic002G304900 Sobic002G304900 Sobic002G406500--Sobic002G304900
Octagon: transcription factors


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