Gene annotation
Transcriptome id Sobic.010G039800.1
Synonym Sb10g003530
Functional annotation expressed protein
UniProt C5Z4A2
Pfam -
Panther DB PTHR15660 PTHR15660:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32960 : -
RAP-DB (Rice) LOC_Os06g05720.1 : expressed protein
MaizeGDB (Corn) Zm00025a041551 , Zm00025a037086
Brachypodium PNT76629 , KQK19841 , KQK19840
Barley HORVU7Hr1G021910.2 , HORVU7Hr1G021910.1
Wheat TraesCS7D02G097800 , TraesCS7A02G104100 , TraesCS4A02G402500
Populus -


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cDNA sequences
Sobic.010G039800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
2 Sobic.007G095400 expressed protein -
3 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
4 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
5 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
6 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
7 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
8 Sobic.002G373800 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
9 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
10 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
11 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
12 Sobic.009G068800 expressed protein -
13 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
14 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
15 Sobic.010G243200 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
16 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
17 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
18 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.008G132800 expressed protein -


Gene co-expression network
sample Sobic010G039800 Sobic010G039800 Sobic002G263800 Sobic002G263800 Sobic010G039800--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic010G039800--Sobic007G095400 Sobic004G248800 Sobic004G248800 Sobic010G039800--Sobic004G248800 Sobic001G529000 Sobic001G529000 Sobic010G039800--Sobic001G529000 Sobic008G161800 Sobic008G161800 Sobic010G039800--Sobic008G161800 Sobic009G016201 Sobic009G016201 Sobic010G039800--Sobic009G016201 Sobic002G218000 Sobic002G218000 Sobic010G039800--Sobic002G218000 Sobic002G373800 Sobic002G373800 Sobic010G039800--Sobic002G373800 Sobic009G036900 Sobic009G036900 Sobic010G039800--Sobic009G036900 Sobic002G263800--Sobic008G161800 Sobic002G263800--Sobic007G095400 Sobic001G483100 Sobic001G483100 Sobic002G263800--Sobic001G483100 Sobic009G180000 Sobic009G180000 Sobic002G263800--Sobic009G180000 Sobic010G173100 Sobic010G173100 Sobic002G263800--Sobic010G173100 Sobic002G263800--Sobic010G039800 Sobic002G263800--Sobic009G016201 Sobic010G204500 Sobic010G204500 Sobic002G263800--Sobic010G204500 Sobic004G310300 Sobic004G310300 Sobic002G263800--Sobic004G310300 Sobic007G095400--Sobic002G263800 Sobic007G095400--Sobic009G016201 Sobic007G095400--Sobic008G161800 Sobic007G095400--Sobic010G039800 Sobic007G095400--Sobic009G180000 Sobic004G196300 Sobic004G196300 Sobic007G095400--Sobic004G196300 Sobic007G095400--Sobic001G483100 Sobic007G095400--Sobic010G173100 Sobic010G042800 Sobic010G042800 Sobic007G095400--Sobic010G042800 Sobic006G141500 Sobic006G141500 Sobic004G248800--Sobic006G141500 Sobic004G248800--Sobic001G529000 Sobic004G248800--Sobic010G039800 Sobic003G253000 Sobic003G253000 Sobic004G248800--Sobic003G253000 Sobic004G293700 Sobic004G293700 Sobic004G248800--Sobic004G293700 Sobic004G248800--Sobic008G161800 Sobic004G248800--Sobic002G263800 Sobic004G248800--Sobic002G218000 Sobic003G249800 Sobic003G249800 Sobic004G248800--Sobic003G249800 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic008G161800--Sobic002G263800 Sobic008G161800--Sobic006G141500 Sobic001G415500 Sobic001G415500 Sobic008G161800--Sobic001G415500 Sobic008G161800--Sobic003G253000 Sobic006G108400 Sobic006G108400 Sobic008G161800--Sobic006G108400 Sobic008G161800--Sobic007G095400 Sobic010G154700 Sobic010G154700 Sobic008G161800--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G161800--Sobic001G132100 Sobic008G161800--Sobic004G248800 Sobic009G016201--Sobic002G263800 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic001G037000 Sobic001G037000 Sobic009G016201--Sobic001G037000 Sobic008G161000 Sobic008G161000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic002G218000--Sobic009G180000 Sobic002G218000--Sobic006G141500 Sobic002G218000--Sobic003G249800 Sobic002G218000--Sobic010G204500 Sobic005G111100 Sobic005G111100 Sobic002G218000--Sobic005G111100 Sobic001G066700 Sobic001G066700 Sobic002G218000--Sobic001G066700 Sobic010G106200 Sobic010G106200 Sobic002G218000--Sobic010G106200 Sobic010G243200 Sobic010G243200 Sobic002G218000--Sobic010G243200 Sobic002G330000 Sobic002G330000 Sobic002G218000--Sobic002G330000 Sobic001G517600 Sobic001G517600 Sobic002G373800--Sobic001G517600 Sobic002G373800--Sobic010G173100 Sobic002G406500 Sobic002G406500 Sobic002G373800--Sobic002G406500 Sobic002G373800--Sobic002G263800 Sobic003G280700 Sobic003G280700 Sobic002G373800--Sobic003G280700 Sobic001G436200 Sobic001G436200 Sobic002G373800--Sobic001G436200 Sobic002G373800--Sobic005G111100 Sobic001G011200 Sobic001G011200 Sobic002G373800--Sobic001G011200 Sobic002G374900 Sobic002G374900 Sobic002G373800--Sobic002G374900 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic009G036900--Sobic010G039800 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500
Octagon: transcription factors


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