Gene annotation
Transcriptome id Sobic.010G267900.3
Synonym Sb10g030290
Functional annotation expressed protein
UniProt A0A1W0VV45
Pfam -
Panther DB PTHR37194
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47820 : -
RAP-DB (Rice) LOC_Os06g50350.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16713
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G267900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
2 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
3 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
4 Sobic.003G055500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
5 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
6 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
7 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
8 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
9 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
10 Sobic.006G115000 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
11 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
12 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
13 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
14 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
15 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
16 Sobic.004G196400 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
17 Sobic.009G050200 expressed protein K15141: mediator of RNA polymerase II transcription subunit 28
18 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
19 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
20 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e


Gene co-expression network
sample Sobic010G267900 Sobic010G267900 Sobic007G163700 Sobic007G163700 Sobic010G267900--Sobic007G163700 Sobic006G231700 Sobic006G231700 Sobic010G267900--Sobic006G231700 Sobic001G529000 Sobic001G529000 Sobic010G267900--Sobic001G529000 Sobic003G055500 Sobic003G055500 Sobic010G267900--Sobic003G055500 Sobic006G052400 Sobic006G052400 Sobic010G267900--Sobic006G052400 Sobic005G111100 Sobic005G111100 Sobic010G267900--Sobic005G111100 Sobic003G129800 Sobic003G129800 Sobic010G267900--Sobic003G129800 Sobic004G066800 Sobic004G066800 Sobic010G267900--Sobic004G066800 Sobic008G058300 Sobic008G058300 Sobic010G267900--Sobic008G058300 Sobic007G163700--Sobic006G231700 Sobic001G517600 Sobic001G517600 Sobic007G163700--Sobic001G517600 Sobic005G157200 Sobic005G157200 Sobic007G163700--Sobic005G157200 Sobic007G163700--Sobic010G267900 Sobic007G163700--Sobic001G529000 Sobic001G128400 Sobic001G128400 Sobic007G163700--Sobic001G128400 Sobic003G362400 Sobic003G362400 Sobic007G163700--Sobic003G362400 Sobic002G373800 Sobic002G373800 Sobic007G163700--Sobic002G373800 Sobic003G018600 Sobic003G018600 Sobic007G163700--Sobic003G018600 Sobic006G231700--Sobic005G111100 Sobic006G231700--Sobic007G163700 Sobic001G094500 Sobic001G094500 Sobic006G231700--Sobic001G094500 Sobic006G013900 Sobic006G013900 Sobic006G231700--Sobic006G013900 Sobic003G358300 Sobic003G358300 Sobic006G231700--Sobic003G358300 Sobic006G231700--Sobic001G128400 Sobic006G231700--Sobic003G129800 Sobic006G231700--Sobic001G517600 Sobic004G137900 Sobic004G137900 Sobic006G231700--Sobic004G137900 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic003G055500--Sobic001G529000 Sobic003G055500--Sobic005G157200 Sobic003G055500--Sobic008G058300 Sobic003G055500--Sobic005G111100 Sobic003G055500--Sobic010G267900 Sobic002G406200 Sobic002G406200 Sobic003G055500--Sobic002G406200 Sobic006G150600 Sobic006G150600 Sobic003G055500--Sobic006G150600 Sobic010G065400 Sobic010G065400 Sobic003G055500--Sobic010G065400 Sobic002G406500 Sobic002G406500 Sobic003G055500--Sobic002G406500 Sobic006G052400--Sobic008G058300 Sobic001G058900 Sobic001G058900 Sobic006G052400--Sobic001G058900 Sobic009G050200 Sobic009G050200 Sobic006G052400--Sobic009G050200 Sobic001G096100 Sobic001G096100 Sobic006G052400--Sobic001G096100 Sobic006G115000 Sobic006G115000 Sobic006G052400--Sobic006G115000 Sobic001G225700 Sobic001G225700 Sobic006G052400--Sobic001G225700 Sobic003G442400 Sobic003G442400 Sobic006G052400--Sobic003G442400 Sobic006G052400--Sobic003G018600 Sobic009G117000 Sobic009G117000 Sobic006G052400--Sobic009G117000 Sobic005G111100--Sobic001G128400 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic007G152400 Sobic007G152400 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic003G129800--Sobic001G128400 Sobic003G129800--Sobic005G111100 Sobic002G304900 Sobic002G304900 Sobic003G129800--Sobic002G304900 Sobic003G249700 Sobic003G249700 Sobic003G129800--Sobic003G249700 Sobic003G129800--Sobic001G058900 Sobic001G513500 Sobic001G513500 Sobic003G129800--Sobic001G513500 Sobic009G223300 Sobic009G223300 Sobic003G129800--Sobic009G223300 Sobic003G129800--Sobic004G066800 Sobic005G050500 Sobic005G050500 Sobic003G129800--Sobic005G050500 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic007G092100 Sobic007G092100 Sobic004G066800--Sobic007G092100 Sobic010G154700 Sobic010G154700 Sobic004G066800--Sobic010G154700 Sobic004G066800--Sobic005G111100 Sobic004G066800--Sobic001G513500 Sobic003G155400 Sobic003G155400 Sobic004G066800--Sobic003G155400 Sobic009G191200 Sobic009G191200 Sobic004G066800--Sobic009G191200 Sobic008G058300--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic008G058300--Sobic003G025200 Sobic008G058300--Sobic001G331900 Sobic008G058300--Sobic006G052400 Sobic008G058300--Sobic004G300900 Sobic010G029400 Sobic010G029400 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic001G377800 Sobic001G377800 Sobic008G058300--Sobic001G377800
Octagon: transcription factors


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