Gene annotation
Transcriptome id Sobic.001G089100.3,Sobic.001G089100.4,Sobic.001G089100.2
Synonym Sb01g008040
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
periplasmic beta-glucosidase precursor, putative, expressed
UniProt A0A1B6QI05
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF39
NCBI CDD -
KEGG Orthology K05349; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20950 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os03g53800.1,LOC_Os03g53800.5,LOC_Os03g53800.2 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016800 , Zm00025a016801 , Zm00025a008146
Brachypodium KQK13208 , KQK13203 , KQK13202 , KQK13201 , KQK13200 , KQK13204 , KQK13199 , KQK13206
Barley HORVU1Hr1G028570.7 , HORVU1Hr1G028570.6 , HORVU1Hr1G028570.9 , HORVU1Hr1G028570.8 , HORVU5Hr1G095220.1 , HORVU1Hr1G015130.1 , HORVU5Hr1G095220.3 , HORVU5Hr1G095220.2 , HORVU5Hr1G095220.4 , HORVU7Hr1G068460.1 , HORVU7Hr1G068460.3 , HORVU7Hr1G068460.2 , HORVU7Hr1G068460.5 , HORVU7Hr1G068460.4 , HORVU5Hr1G095130.1 , HORVU5Hr1G095130.3 , HORVU5Hr1G095130.2 , HORVU5Hr1G095060.22 , HORVU5Hr1G095130.7 , HORVU5Hr1G095060.21 , HORVU5Hr1G095130.9 , HORVU5Hr1G095080.20 , HORVU5Hr1G095080.21 , HORVU5Hr1G095080.22 , HORVU5Hr1G095080.23 , HORVU5Hr1G095060.20 , HORVU5Hr1G095130.6 , HORVU5Hr1G095080.9 , HORVU5Hr1G095080.8 , HORVU5Hr1G095080.1 , HORVU5Hr1G095080.3 , HORVU5Hr1G095080.2 , HORVU5Hr1G095080.5 , HORVU5Hr1G095080.4 , HORVU5Hr1G095080.7 , HORVU5Hr1G095080.6 , HORVU1Hr1G028570.42 , HORVU1Hr1G028570.43 , HORVU1Hr1G028570.40 , HORVU1Hr1G028570.41 , HORVU1Hr1G028570.46 , HORVU1Hr1G028570.44 , HORVU1Hr1G028570.45 , HORVU5Hr1G095080.19 , HORVU5Hr1G095080.18 , HORVU5Hr1G095080.15 , HORVU5Hr1G095080.14 , HORVU5Hr1G095080.17 , HORVU5Hr1G095080.16 , HORVU5Hr1G095080.11 , HORVU5Hr1G095080.10 , HORVU5Hr1G095080.13 , HORVU5Hr1G095080.12 , HORVU1Hr1G028570.39 , HORVU1Hr1G028570.38 , HORVU1Hr1G028570.37 , HORVU1Hr1G028570.36 , HORVU1Hr1G028570.35 , HORVU1Hr1G028570.34 , HORVU1Hr1G028570.33 , HORVU1Hr1G028570.32 , HORVU1Hr1G028570.31 , HORVU1Hr1G028570.30 , HORVU1Hr1G015130.5 , HORVU1Hr1G015130.4 , HORVU1Hr1G028570.28 , HORVU1Hr1G028570.29 , HORVU1Hr1G015130.3 , HORVU1Hr1G015130.2 , HORVU1Hr1G028570.24 , HORVU1Hr1G028570.25 , HORVU1Hr1G028570.26 , HORVU1Hr1G028570.27 , HORVU1Hr1G028570.20 , HORVU1Hr1G028570.21 , HORVU1Hr1G028570.22 , HORVU1Hr1G028570.23 , HORVU3Hr1G034870.7 , HORVU3Hr1G034870.6 , HORVU3Hr1G034870.5 , HORVU3Hr1G034870.3 , HORVU3Hr1G034870.2 , HORVU3Hr1G034870.1 , HORVU5Hr1G095130.15 , HORVU5Hr1G095130.14 , HORVU5Hr1G095130.17 , HORVU5Hr1G095130.16 , HORVU5Hr1G095130.11 , HORVU5Hr1G095130.13 , HORVU5Hr1G095130.19 , HORVU5Hr1G095130.18 , HORVU5Hr1G095060.7 , HORVU5Hr1G095060.6 , HORVU5Hr1G095060.5 , HORVU5Hr1G095060.4 , HORVU5Hr1G095060.3 , HORVU5Hr1G095060.2 , HORVU5Hr1G095060.9 , HORVU5Hr1G095060.8 , HORVU5Hr1G095130.5 , HORVU5Hr1G095060.19 , HORVU5Hr1G095060.18 , HORVU5Hr1G095060.17 , HORVU5Hr1G095060.16 , HORVU5Hr1G095060.15 , HORVU5Hr1G095060.14 , HORVU5Hr1G095060.13 , HORVU5Hr1G095060.12 , HORVU5Hr1G095060.11 , HORVU5Hr1G095060.10 , HORVU1Hr1G028570.11 , HORVU1Hr1G028570.10 , HORVU1Hr1G028570.13 , HORVU1Hr1G028570.12 , HORVU1Hr1G028570.15 , HORVU1Hr1G028570.14 , HORVU1Hr1G028570.17 , HORVU1Hr1G028570.16 , HORVU1Hr1G028570.19 , HORVU1Hr1G028570.18
Wheat TraesCS5A02G388300 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5A02G388900 , TraesCS3D02G179000 , TraesCS5B02G393900 , TraesCS5D02G398900 , TraesCS5B02G393700 , TraesCS3B02G203300 , TraesCS3B02G203300 , TraesCS5D02G398500 , TraesCS5B02G393800 , TraesCS5B02G394300 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5A02G388500 , TraesCS5D02G399100 , TraesCS5D02G398400 , TraesCS5A02G388400 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5B02G393300 , TraesCS5B02G393300 , TraesCS3A02G172500
Populus PNT21538 , PNT21537 , PNT21539


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cDNA sequences
Sobic.001G089100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
2 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
3 Sobic.001G479800 glycosyl transferase, putative, expressed -
4 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
5 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
6 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
7 Sobic.008G106800 isoflavone reductase, putative, expressed -
8 Sobic.004G134100 glycosyltransferase, putative, expressed -
9 Sobic.001G348900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
10 Sobic.006G149101 - -
11 Sobic.003G380500 expressed protein -
12 Sobic.008G008400 F-box/LRR-repeat protein 3, putative, expressed -
13 Sobic.009G214600 possible lysine decarboxylase domain containing protein, expressed -
14 Sobic.001G023400 chloroplast protein import component Toc159, putative, expressed -
15 Sobic.009G129500 cyclin, putative, expressed -
16 Sobic.004G067000 expressed protein -
17 Sobic.004G099100 expressed protein -
18 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
19 Sobic.004G154600 expressed protein -
20 Sobic.010G077600 gb protein, putative, expressed -


Gene co-expression network
sample Sobic001G089100 Sobic001G089100 Sobic006G213100 Sobic006G213100 Sobic001G089100--Sobic006G213100 Sobic009G026200 Sobic009G026200 Sobic001G089100--Sobic009G026200 Sobic001G479800 Sobic001G479800 Sobic001G089100--Sobic001G479800 Sobic003G151300 Sobic003G151300 Sobic001G089100--Sobic003G151300 Sobic003G328800 Sobic003G328800 Sobic001G089100--Sobic003G328800 Sobic006G133600 Sobic006G133600 Sobic001G089100--Sobic006G133600 Sobic008G106800 Sobic008G106800 Sobic001G089100--Sobic008G106800 Sobic004G134100 Sobic004G134100 Sobic001G089100--Sobic004G134100 Sobic001G348900 Sobic001G348900 Sobic001G089100--Sobic001G348900 Sobic006G213100--Sobic006G133600 Sobic009G214600 Sobic009G214600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic008G174800 Sobic008G174800 Sobic009G026200--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic009G026200--Sobic010G224900 Sobic008G008400 Sobic008G008400 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic001G479800--Sobic008G106800 Sobic009G065000 Sobic009G065000 Sobic001G479800--Sobic009G065000 Sobic001G479800--Sobic009G214600 Sobic001G479800--Sobic001G089100 Sobic004G164500 Sobic004G164500 Sobic001G479800--Sobic004G164500 Sobic001G479800--Sobic001G348900 Sobic001G479800--Sobic003G328800 Sobic001G479800--Sobic006G133600 Sobic001G479800--Sobic009G026200 Sobic003G151300--Sobic009G026200 Sobic003G151300--Sobic008G008400 Sobic003G151300--Sobic008G174800 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic001G107200 Sobic001G107200 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic003G151300--Sobic004G134100 Sobic003G328800--Sobic006G213100 Sobic005G012000 Sobic005G012000 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G328800--Sobic003G397300 Sobic008G126200 Sobic008G126200 Sobic003G328800--Sobic008G126200 Sobic003G380500 Sobic003G380500 Sobic003G328800--Sobic003G380500 Sobic001G082300 Sobic001G082300 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G328800--Sobic003G044900 Sobic004G240900 Sobic004G240900 Sobic006G133600--Sobic004G240900 Sobic006G262600 Sobic006G262600 Sobic006G133600--Sobic006G262600 Sobic006G133600--Sobic006G213100 Sobic006G133600--Sobic003G044900 Sobic006G133600--Sobic009G214600 Sobic006G133600--Sobic007G099500 Sobic001G024200 Sobic001G024200 Sobic006G133600--Sobic001G024200 Sobic009G059600 Sobic009G059600 Sobic006G133600--Sobic009G059600 Sobic002G221700 Sobic002G221700 Sobic006G133600--Sobic002G221700 Sobic008G106800--Sobic004G164500 Sobic001G471900 Sobic001G471900 Sobic008G106800--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic008G106800--Sobic001G056700 Sobic008G106800--Sobic009G065000 Sobic003G273100 Sobic003G273100 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic008G106800--Sobic001G311000 Sobic002G278300 Sobic002G278300 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic004G134100--Sobic001G069800 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic004G134100--Sobic003G151300 Sobic001G348900--Sobic001G479800 Sobic001G348900--Sobic001G089100 Sobic001G348900--Sobic009G026200 Sobic001G348900--Sobic006G213100 Sobic001G348900--Sobic006G133600 Sobic001G516500 Sobic001G516500 Sobic001G348900--Sobic001G516500 Sobic001G348900--Sobic008G174800 Sobic001G348900--Sobic003G151300 Sobic001G348900--Sobic009G214600
Octagon: transcription factors


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