Gene annotation
Transcriptome id Sobic.001G348900.1
Synonym SCPL51, Sb01g033400
Functional annotation OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1Z5S979
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF65
NCBI CDD KOG1283; Serine carboxypeptidases
KEGG Orthology K09646; serine carboxypeptidase 1
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G27920 : serine carboxypeptidase-like 51
RAP-DB (Rice) LOC_Os03g27590.1 : OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a002742 , Zm00025a052123
Brachypodium KQK21412 , KQK21411 , PNT66046 , PNT66047 , KQJ93707 , KQK15711
Barley HORVU1Hr1G044200.4 , HORVU1Hr1G044200.1 , HORVU1Hr1G044200.3 , HORVU1Hr1G044200.2 , HORVU1Hr1G077320.14 , HORVU1Hr1G077320.12 , HORVU1Hr1G077320.13 , HORVU1Hr1G077320.10 , HORVU1Hr1G077320.11 , HORVU1Hr1G077320.8 , HORVU1Hr1G077320.9 , HORVU1Hr1G077320.4 , HORVU1Hr1G077320.5 , HORVU1Hr1G077320.7 , HORVU1Hr1G077320.3 , HORVU6Hr1G012790.2
Wheat TraesCS1A02G168100 , TraesCS1A02G331100 , TraesCS1A02G331100 , TraesCS6D02G069900 , TraesCS1D02G333800 , TraesCS1D02G333800 , TraesCS1D02G172800 , TraesCS6B02G096300 , TraesCS6A02G071800 , TraesCS1B02G184500 , TraesCS1B02G184500 , TraesCS1B02G184500 , TraesCS1B02G345000 , TraesCS1B02G345000
Populus -


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cDNA sequences
Sobic.001G348900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G479800 glycosyl transferase, putative, expressed -
2 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
3 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
4 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
5 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
6 Sobic.001G516500 expansin precursor, putative, expressed -
7 Sobic.008G174800 DNA binding protein, putative, expressed -
8 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
9 Sobic.009G214600 possible lysine decarboxylase domain containing protein, expressed -
10 Sobic.003G397300 - -
11 Sobic.001G250100 thaumatin, putative, expressed -
12 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
13 Sobic.006G130501 - -
14 Sobic.004G067000 expressed protein -
15 Sobic.010G003700 scarecrow, putative, expressed -
16 Sobic.003G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
18 Sobic.004G086100 tetratricopeptide repeat domain containing protein, expressed -
19 Sobic.001G215900 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.001G194000 DEFL6 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic001G348900 Sobic001G348900 Sobic001G479800 Sobic001G479800 Sobic001G348900--Sobic001G479800 Sobic001G089100 Sobic001G089100 Sobic001G348900--Sobic001G089100 Sobic009G026200 Sobic009G026200 Sobic001G348900--Sobic009G026200 Sobic006G213100 Sobic006G213100 Sobic001G348900--Sobic006G213100 Sobic006G133600 Sobic006G133600 Sobic001G348900--Sobic006G133600 Sobic001G516500 Sobic001G516500 Sobic001G348900--Sobic001G516500 Sobic008G174800 Sobic008G174800 Sobic001G348900--Sobic008G174800 Sobic003G151300 Sobic003G151300 Sobic001G348900--Sobic003G151300 Sobic009G214600 Sobic009G214600 Sobic001G348900--Sobic009G214600 Sobic008G106800 Sobic008G106800 Sobic001G479800--Sobic008G106800 Sobic009G065000 Sobic009G065000 Sobic001G479800--Sobic009G065000 Sobic001G479800--Sobic009G214600 Sobic001G479800--Sobic001G089100 Sobic004G164500 Sobic004G164500 Sobic001G479800--Sobic004G164500 Sobic001G479800--Sobic001G348900 Sobic003G328800 Sobic003G328800 Sobic001G479800--Sobic003G328800 Sobic001G479800--Sobic006G133600 Sobic001G479800--Sobic009G026200 Sobic001G089100--Sobic006G213100 Sobic001G089100--Sobic009G026200 Sobic001G089100--Sobic001G479800 Sobic001G089100--Sobic003G151300 Sobic001G089100--Sobic003G328800 Sobic001G089100--Sobic006G133600 Sobic001G089100--Sobic008G106800 Sobic004G134100 Sobic004G134100 Sobic001G089100--Sobic004G134100 Sobic001G089100--Sobic001G348900 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic009G026200--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic009G026200--Sobic010G224900 Sobic008G008400 Sobic008G008400 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic006G213100--Sobic006G133600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500 Sobic004G240900 Sobic004G240900 Sobic006G133600--Sobic004G240900 Sobic006G262600 Sobic006G262600 Sobic006G133600--Sobic006G262600 Sobic006G133600--Sobic006G213100 Sobic006G133600--Sobic003G044900 Sobic006G133600--Sobic009G214600 Sobic006G133600--Sobic007G099500 Sobic001G024200 Sobic001G024200 Sobic006G133600--Sobic001G024200 Sobic009G059600 Sobic009G059600 Sobic006G133600--Sobic009G059600 Sobic002G221700 Sobic002G221700 Sobic006G133600--Sobic002G221700 Sobic003G034500 Sobic003G034500 Sobic001G516500--Sobic003G034500 Sobic001G516500--Sobic008G106800 Sobic001G471900 Sobic001G471900 Sobic001G516500--Sobic001G471900 Sobic001G230700 Sobic001G230700 Sobic001G516500--Sobic001G230700 Sobic001G516500--Sobic009G065000 Sobic001G516500--Sobic004G164500 Sobic006G241300 Sobic006G241300 Sobic001G516500--Sobic006G241300 Sobic006G194150 Sobic006G194150 Sobic001G516500--Sobic006G194150 Sobic001G028800 Sobic001G028800 Sobic001G516500--Sobic001G028800 Sobic008G174800--Sobic003G151300 Sobic008G174800--Sobic009G026200 Sobic003G198500 Sobic003G198500 Sobic008G174800--Sobic003G198500 Sobic004G247300 Sobic004G247300 Sobic008G174800--Sobic004G247300 Sobic009G079100 Sobic009G079100 Sobic008G174800--Sobic009G079100 Sobic008G174800--Sobic004G051300 Sobic008G174800--Sobic008G008400 Sobic010G060600 Sobic010G060600 Sobic008G174800--Sobic010G060600 Sobic008G174800--Sobic004G134100 Sobic003G151300--Sobic009G026200 Sobic003G151300--Sobic008G008400 Sobic003G151300--Sobic008G174800 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic001G107200 Sobic001G107200 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic003G151300--Sobic004G134100 Sobic009G214600--Sobic003G044900 Sobic007G094801 Sobic007G094801 Sobic009G214600--Sobic007G094801 SobicK016900 SobicK016900 Sobic009G214600--SobicK016900 Sobic004G016500 Sobic004G016500 Sobic009G214600--Sobic004G016500 Sobic009G214600--Sobic004G240900 Sobic009G214600--Sobic006G133600 Sobic009G214600--Sobic006G213100 Sobic002G150766 Sobic002G150766 Sobic009G214600--Sobic002G150766 Sobic001G046600 Sobic001G046600 Sobic009G214600--Sobic001G046600
Octagon: transcription factors


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