Gene annotation
Transcriptome id Sobic.006G149101.1
Synonym -
Functional annotation -
UniProt A0A1Z5REW1
Pfam PF11779
Panther DB PTHR33727 PTHR33727:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06515 : Protein of unknown function (DUF3317)
RAP-DB (Rice) LOC_Os04g43824.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16452
Barley -
Wheat TraesCS2B02G397800 , TraesCS2D02G377000 , TraesCS2A02G380700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
2 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
3 Sobic.003G380500 expressed protein -
4 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
5 Sobic.007G195400 FHA domain containing protein, putative, expressed -
6 Sobic.004G349100 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
7 Sobic.006G262600 expressed protein -
8 Sobic.010G118700 microtubule-associated protein, putative, expressed -
9 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
10 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
11 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
12 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
13 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.010G042900 expressed protein -
15 Sobic.007G094801 - -
16 Sobic.004G154600 expressed protein -
17 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
19 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
20 Sobic.003G437500 syntaxin 6, putative, expressed -


Gene co-expression network
sample Sobic006G149101 Sobic006G149101 Sobic001G179000 Sobic001G179000 Sobic006G149101--Sobic001G179000 Sobic006G213100 Sobic006G213100 Sobic006G149101--Sobic006G213100 Sobic003G380500 Sobic003G380500 Sobic006G149101--Sobic003G380500 Sobic007G191100 Sobic007G191100 Sobic006G149101--Sobic007G191100 Sobic007G195400 Sobic007G195400 Sobic006G149101--Sobic007G195400 Sobic004G349100 Sobic004G349100 Sobic006G149101--Sobic004G349100 Sobic006G262600 Sobic006G262600 Sobic006G149101--Sobic006G262600 Sobic010G118700 Sobic010G118700 Sobic006G149101--Sobic010G118700 Sobic003G328800 Sobic003G328800 Sobic006G149101--Sobic003G328800 Sobic007G224900 Sobic007G224900 Sobic001G179000--Sobic007G224900 Sobic001G179000--Sobic003G380500 Sobic001G179000--Sobic006G149101 Sobic001G179000--Sobic007G195400 Sobic001G179000--Sobic004G349100 Sobic009G183500 Sobic009G183500 Sobic001G179000--Sobic009G183500 Sobic003G074000 Sobic003G074000 Sobic001G179000--Sobic003G074000 Sobic002G221900 Sobic002G221900 Sobic001G179000--Sobic002G221900 Sobic007G023700 Sobic007G023700 Sobic001G179000--Sobic007G023700 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic009G214600 Sobic009G214600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500 Sobic003G380500--Sobic006G262600 Sobic002G007200 Sobic002G007200 Sobic003G380500--Sobic002G007200 Sobic003G380500--Sobic001G179000 Sobic002G221700 Sobic002G221700 Sobic003G380500--Sobic002G221700 Sobic003G380500--Sobic007G191100 Sobic009G164900 Sobic009G164900 Sobic003G380500--Sobic009G164900 Sobic004G250700 Sobic004G250700 Sobic003G380500--Sobic004G250700 Sobic003G380500--Sobic007G195400 Sobic007G008800 Sobic007G008800 Sobic003G380500--Sobic007G008800 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic003G359300 Sobic003G359300 Sobic007G195400--Sobic003G359300 Sobic007G195400--Sobic004G061900 Sobic007G195400--Sobic008G034600 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic007G195400--Sobic003G093600 Sobic001G216600 Sobic001G216600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100 Sobic003G024800 Sobic003G024800 Sobic004G349100--Sobic003G024800 Sobic001G350501 Sobic001G350501 Sobic004G349100--Sobic001G350501 Sobic004G349100--Sobic001G179000 Sobic009G034400 Sobic009G034400 Sobic004G349100--Sobic009G034400 Sobic001G309100 Sobic001G309100 Sobic004G349100--Sobic001G309100 Sobic003G101300 Sobic003G101300 Sobic004G349100--Sobic003G101300 Sobic003G437500 Sobic003G437500 Sobic004G349100--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic004G349100--Sobic005G000800 Sobic004G349100--Sobic007G195400 Sobic006G262600--Sobic002G007200 Sobic006G262600--Sobic003G380500 Sobic006G262600--Sobic006G133600 Sobic002G367300 Sobic002G367300 Sobic006G262600--Sobic002G367300 Sobic001G049600 Sobic001G049600 Sobic006G262600--Sobic001G049600 Sobic004G154600 Sobic004G154600 Sobic006G262600--Sobic004G154600 Sobic002G250400 Sobic002G250400 Sobic006G262600--Sobic002G250400 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600 Sobic010G118700--Sobic003G115100 Sobic008G086200 Sobic008G086200 Sobic010G118700--Sobic008G086200 Sobic002G224700 Sobic002G224700 Sobic010G118700--Sobic002G224700 Sobic010G118700--Sobic007G195400 Sobic003G412300 Sobic003G412300 Sobic010G118700--Sobic003G412300 Sobic007G086500 Sobic007G086500 Sobic010G118700--Sobic007G086500 Sobic001G226000 Sobic001G226000 Sobic010G118700--Sobic001G226000 Sobic001G367100 Sobic001G367100 Sobic010G118700--Sobic001G367100 Sobic003G380400 Sobic003G380400 Sobic010G118700--Sobic003G380400 Sobic003G328800--Sobic006G213100 Sobic005G012000 Sobic005G012000 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G328800--Sobic003G397300 Sobic008G126200 Sobic008G126200 Sobic003G328800--Sobic008G126200 Sobic003G328800--Sobic003G380500 Sobic001G082300 Sobic001G082300 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G328800--Sobic003G044900
Octagon: transcription factors


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