Gene annotation
Transcriptome id Sobic.001G023400.3,Sobic.001G023400.2
Synonym Sb01g002230, TOC159, PPI2, ATTOC159, TOC160, TOC86
Functional annotation chloroplast protein import component Toc159, putative, expressed
UniProt A0A1Z5S403 , A0A1Z5S416
Pfam PF04548 PF11886
Panther DB PTHR10903 PTHR10903:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT4G02510 : translocon at the outer envelope membrane of chloroplasts 159
RAP-DB (Rice) LOC_Os03g61890.1 : chloroplast protein import component Toc159, putative, expressed
MaizeGDB (Corn) Zm00025a016376 , Zm00025a008934
Brachypodium PNT73845 , KQK12284 , KQK12283
Barley HORVU5Hr1G117690.20 , HORVU5Hr1G117690.19 , HORVU5Hr1G117690.18 , HORVU5Hr1G117690.11 , HORVU5Hr1G117690.10 , HORVU5Hr1G117690.13 , HORVU5Hr1G117690.12 , HORVU5Hr1G117690.15 , HORVU5Hr1G117690.14 , HORVU5Hr1G117690.17 , HORVU5Hr1G117690.16 , HORVU5Hr1G117690.9 , HORVU5Hr1G117690.8 , HORVU5Hr1G117690.5 , HORVU5Hr1G117690.4 , HORVU5Hr1G117690.7 , HORVU5Hr1G117690.6 , HORVU5Hr1G117690.1 , HORVU5Hr1G117690.3 , HORVU5Hr1G117690.2
Wheat TraesCS4A02G358400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
2 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
4 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
5 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
6 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
7 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.009G225200 expressed protein -
9 Sobic.008G173000 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
10 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
11 Sobic.004G134100 glycosyltransferase, putative, expressed -
12 Sobic.007G195400 FHA domain containing protein, putative, expressed -
13 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
14 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
15 Sobic.005G096000 resistance protein, putative, expressed -
16 Sobic.010G012600 expressed protein -
17 Sobic.001G216600 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
19 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
20 Sobic.002G294900 H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -


Gene co-expression network
sample Sobic001G023400 Sobic001G023400 Sobic001G467000 Sobic001G467000 Sobic001G023400--Sobic001G467000 Sobic010G249300 Sobic010G249300 Sobic001G023400--Sobic010G249300 Sobic001G226100 Sobic001G226100 Sobic001G023400--Sobic001G226100 Sobic001G464100 Sobic001G464100 Sobic001G023400--Sobic001G464100 Sobic001G089100 Sobic001G089100 Sobic001G023400--Sobic001G089100 Sobic007G191100 Sobic007G191100 Sobic001G023400--Sobic007G191100 Sobic004G150400 Sobic004G150400 Sobic001G023400--Sobic004G150400 Sobic009G225200 Sobic009G225200 Sobic001G023400--Sobic009G225200 Sobic008G173000 Sobic008G173000 Sobic001G023400--Sobic008G173000 Sobic001G372000 Sobic001G372000 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G512600 Sobic001G512600 Sobic001G467000--Sobic001G512600 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G291100 Sobic001G291100 Sobic001G467000--Sobic001G291100 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G146600 Sobic010G146600 Sobic010G249300--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic010G251100 Sobic010G251100 Sobic001G226100--Sobic010G251100 Sobic001G402300 Sobic001G402300 Sobic001G226100--Sobic001G402300 Sobic004G141700 Sobic004G141700 Sobic001G226100--Sobic004G141700 Sobic009G232400 Sobic009G232400 Sobic001G226100--Sobic009G232400 Sobic002G306400 Sobic002G306400 Sobic001G226100--Sobic002G306400 Sobic007G118000 Sobic007G118000 Sobic001G226100--Sobic007G118000 Sobic006G252100 Sobic006G252100 Sobic001G226100--Sobic006G252100 Sobic001G226100--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic001G226100--Sobic001G054200 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic001G464100--Sobic002G313500 Sobic001G464100--Sobic001G281600 Sobic001G464100--Sobic003G045400 Sobic001G464100--Sobic010G249300 Sobic006G213100 Sobic006G213100 Sobic001G089100--Sobic006G213100 Sobic009G026200 Sobic009G026200 Sobic001G089100--Sobic009G026200 Sobic001G479800 Sobic001G479800 Sobic001G089100--Sobic001G479800 Sobic003G151300 Sobic003G151300 Sobic001G089100--Sobic003G151300 Sobic003G328800 Sobic003G328800 Sobic001G089100--Sobic003G328800 Sobic006G133600 Sobic006G133600 Sobic001G089100--Sobic006G133600 Sobic008G106800 Sobic008G106800 Sobic001G089100--Sobic008G106800 Sobic004G134100 Sobic004G134100 Sobic001G089100--Sobic004G134100 Sobic001G348900 Sobic001G348900 Sobic001G089100--Sobic001G348900 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic009G117300 Sobic009G117300 Sobic009G225200--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic003G258900 Sobic003G258900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic003G442000 Sobic003G442000 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic008G173000--Sobic001G226100 Sobic010G012600 Sobic010G012600 Sobic008G173000--Sobic010G012600 Sobic008G173000--Sobic006G252100 Sobic001G296400 Sobic001G296400 Sobic008G173000--Sobic001G296400 Sobic008G173000--Sobic004G185600 Sobic008G173000--Sobic010G251100 Sobic001G263000 Sobic001G263000 Sobic008G173000--Sobic001G263000 Sobic008G173000--Sobic003G045400 Sobic006G216000 Sobic006G216000 Sobic008G173000--Sobic006G216000
Octagon: transcription factors


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