Gene annotation
Transcriptome id Sobic.002G301400.1
Synonym Sb02g033190
Functional annotation expressed protein
UniProt C5X8I8
Pfam PF13259
Panther DB PTHR33373 PTHR33373:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54880 : -
RAP-DB (Rice) LOC_Os07g29640.1 : expressed protein
MaizeGDB (Corn) Zm00025a014621 , Zm00025a048019
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G301400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
2 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
3 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
4 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
5 Sobic.009G232400 expressed protein -
6 Sobic.006G262900 expressed protein -
7 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
8 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
9 Sobic.010G039800 expressed protein -
10 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
11 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
12 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
13 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
14 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
15 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
17 Sobic.001G088500 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
19 Sobic.003G261400 DUF292 domain containing protein, expressed -
20 Sobic.001G054200 green ripe-like, putative, expressed -


Gene co-expression network
sample Sobic002G301400 Sobic002G301400 Sobic002G353000 Sobic002G353000 Sobic002G301400--Sobic002G353000 Sobic003G124800 Sobic003G124800 Sobic002G301400--Sobic003G124800 Sobic001G529000 Sobic001G529000 Sobic002G301400--Sobic001G529000 Sobic006G232200 Sobic006G232200 Sobic002G301400--Sobic006G232200 Sobic009G232400 Sobic009G232400 Sobic002G301400--Sobic009G232400 Sobic006G262900 Sobic006G262900 Sobic002G301400--Sobic006G262900 Sobic001G402300 Sobic001G402300 Sobic002G301400--Sobic001G402300 Sobic004G224800 Sobic004G224800 Sobic002G301400--Sobic004G224800 Sobic010G039800 Sobic010G039800 Sobic002G301400--Sobic010G039800 Sobic002G353000--Sobic002G301400 Sobic001G481700 Sobic001G481700 Sobic002G353000--Sobic001G481700 Sobic007G220900 Sobic007G220900 Sobic002G353000--Sobic007G220900 Sobic004G138800 Sobic004G138800 Sobic002G353000--Sobic004G138800 Sobic004G224900 Sobic004G224900 Sobic002G353000--Sobic004G224900 Sobic008G132400 Sobic008G132400 Sobic002G353000--Sobic008G132400 Sobic002G406500 Sobic002G406500 Sobic002G353000--Sobic002G406500 Sobic008G132700 Sobic008G132700 Sobic002G353000--Sobic008G132700 Sobic010G042800 Sobic010G042800 Sobic002G353000--Sobic010G042800 Sobic009G198500 Sobic009G198500 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic003G124800--Sobic006G232200 Sobic001G502200 Sobic001G502200 Sobic003G124800--Sobic001G502200 Sobic007G045600 Sobic007G045600 Sobic003G124800--Sobic007G045600 Sobic003G124800--Sobic001G529000 Sobic007G168600 Sobic007G168600 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic006G232200--Sobic003G124800 Sobic006G232200--Sobic007G045600 Sobic001G143300 Sobic001G143300 Sobic006G232200--Sobic001G143300 Sobic006G232200--Sobic009G198500 Sobic004G130100 Sobic004G130100 Sobic006G232200--Sobic004G130100 Sobic003G323600 Sobic003G323600 Sobic006G232200--Sobic003G323600 Sobic001G054200 Sobic001G054200 Sobic006G232200--Sobic001G054200 Sobic008G161800 Sobic008G161800 Sobic006G232200--Sobic008G161800 Sobic001G388200 Sobic001G388200 Sobic006G232200--Sobic001G388200 Sobic004G141700 Sobic004G141700 Sobic009G232400--Sobic004G141700 Sobic009G232400--Sobic001G402300 Sobic003G350600 Sobic003G350600 Sobic009G232400--Sobic003G350600 Sobic001G226100 Sobic001G226100 Sobic009G232400--Sobic001G226100 Sobic001G007200 Sobic001G007200 Sobic009G232400--Sobic001G007200 Sobic010G083700 Sobic010G083700 Sobic009G232400--Sobic010G083700 Sobic010G251100 Sobic010G251100 Sobic009G232400--Sobic010G251100 Sobic009G232400--Sobic001G054200 Sobic007G118000 Sobic007G118000 Sobic009G232400--Sobic007G118000 Sobic006G262900--Sobic009G198500 Sobic006G262900--Sobic003G124800 Sobic006G263900 Sobic006G263900 Sobic006G262900--Sobic006G263900 Sobic001G136900 Sobic001G136900 Sobic006G262900--Sobic001G136900 Sobic006G262900--Sobic001G054200 Sobic006G262900--Sobic010G083700 Sobic001G129300 Sobic001G129300 Sobic006G262900--Sobic001G129300 Sobic006G262900--Sobic007G203700 Sobic007G079700 Sobic007G079700 Sobic006G262900--Sobic007G079700 Sobic008G137600 Sobic008G137600 Sobic001G402300--Sobic008G137600 Sobic001G402300--Sobic001G226100 Sobic001G402300--Sobic004G141700 Sobic001G402300--Sobic010G251100 Sobic001G402300--Sobic007G118000 Sobic001G402300--Sobic009G232400 Sobic002G413400 Sobic002G413400 Sobic001G402300--Sobic002G413400 Sobic001G402300--Sobic001G529000 Sobic001G285300 Sobic001G285300 Sobic001G402300--Sobic001G285300 Sobic004G224800--Sobic003G124800 Sobic004G334800 Sobic004G334800 Sobic004G224800--Sobic004G334800 Sobic004G224800--Sobic001G529000 Sobic004G224800--Sobic004G066800 Sobic004G224800--Sobic001G439600 Sobic004G224800--Sobic010G039800 Sobic001G367000 Sobic001G367000 Sobic004G224800--Sobic001G367000 Sobic001G126200 Sobic001G126200 Sobic004G224800--Sobic001G126200 Sobic004G224800--Sobic001G054200 Sobic002G263800 Sobic002G263800 Sobic010G039800--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic010G039800--Sobic007G095400 Sobic010G039800--Sobic004G248800 Sobic010G039800--Sobic001G529000 Sobic010G039800--Sobic008G161800 Sobic009G016201 Sobic009G016201 Sobic010G039800--Sobic009G016201 Sobic002G218000 Sobic002G218000 Sobic010G039800--Sobic002G218000 Sobic002G373800 Sobic002G373800 Sobic010G039800--Sobic002G373800 Sobic009G036900 Sobic009G036900 Sobic010G039800--Sobic009G036900
Octagon: transcription factors


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