Gene annotation
Transcriptome id Sobic.003G282700.1
Synonym Sb03g033410
Functional annotation protein kri1, putative, expressed
UniProt C5XIG1
Pfam PF05178 PF12936
Panther DB PTHR14490
NCBI CDD KOG2409; KRR1-interacting protein involved in 40S ribosome biogenesis
KEGG Orthology K14786; protein KRI1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24080 : KRR1 family protein
RAP-DB (Rice) LOC_Os05g41100.1 : protein kri1, putative, expressed
MaizeGDB (Corn) Zm00025a018456
Brachypodium KQK05673
Barley HORVU1Hr1G068650.4 , HORVU0Hr1G023280.9 , HORVU0Hr1G023280.8 , HORVU1Hr1G068650.1 , HORVU1Hr1G068650.2 , HORVU1Hr1G068650.3 , HORVU0Hr1G023280.1 , HORVU0Hr1G023280.10 , HORVU0Hr1G023280.7 , HORVU0Hr1G023280.6 , HORVU0Hr1G023280.11
Wheat TraesCS1B02G318100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G188200 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.003G349000 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
3 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
4 Sobic.007G053700 MYB family transcription factor, putative, expressed -
5 Sobic.004G027700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
6 Sobic.003G072500 transcription factor X1, putative, expressed -
7 Sobic.002G154400 MIM, putative, expressed -
8 Sobic.001G177400 frigida, putative, expressed -
9 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
10 Sobic.003G014900 expressed protein -
11 Sobic.002G312800 WD domain, G-beta repeat domain containing protein, expressed K14841: NSA1, ribosome biogenesis protein NSA1
12 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
13 Sobic.001G141700 acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed K18647: acidic leucine-rich nuclear phosphoprotein 32 family member B
14 Sobic.008G022200 RNA-binding zinc finger protein, putative, expressed -
15 Sobic.002G053200 RNA recognition motif containing protein, expressed -
16 Sobic.001G458000 expressed protein -
17 Sobic.009G216500 expressed protein -
18 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
19 Sobic.005G114101 - -
20 Sobic.009G251600 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b


Gene co-expression network
sample Sobic003G282700 Sobic003G282700 Sobic007G188200 Sobic007G188200 Sobic003G282700--Sobic007G188200 Sobic003G349000 Sobic003G349000 Sobic003G282700--Sobic003G349000 Sobic010G241600 Sobic010G241600 Sobic003G282700--Sobic010G241600 Sobic007G053700 Sobic007G053700 Sobic003G282700--Sobic007G053700 Sobic004G027700 Sobic004G027700 Sobic003G282700--Sobic004G027700 Sobic003G072500 Sobic003G072500 Sobic003G282700--Sobic003G072500 Sobic002G154400 Sobic002G154400 Sobic003G282700--Sobic002G154400 Sobic001G177400 Sobic001G177400 Sobic003G282700--Sobic001G177400 Sobic010G237800 Sobic010G237800 Sobic003G282700--Sobic010G237800 Sobic007G188200--Sobic003G282700 Sobic003G397100 Sobic003G397100 Sobic007G188200--Sobic003G397100 Sobic007G188200--Sobic004G027700 Sobic002G429700 Sobic002G429700 Sobic007G188200--Sobic002G429700 Sobic001G039300 Sobic001G039300 Sobic007G188200--Sobic001G039300 Sobic006G250100 Sobic006G250100 Sobic007G188200--Sobic006G250100 Sobic004G233600 Sobic004G233600 Sobic007G188200--Sobic004G233600 Sobic001G088900 Sobic001G088900 Sobic007G188200--Sobic001G088900 Sobic009G216500 Sobic009G216500 Sobic007G188200--Sobic009G216500 Sobic003G349000--Sobic002G154400 Sobic002G312800 Sobic002G312800 Sobic003G349000--Sobic002G312800 Sobic001G141700 Sobic001G141700 Sobic003G349000--Sobic001G141700 Sobic003G349000--Sobic003G282700 Sobic003G349000--Sobic007G053700 Sobic003G349000--Sobic010G237800 Sobic009G042100 Sobic009G042100 Sobic003G349000--Sobic009G042100 Sobic003G349000--Sobic010G241600 Sobic002G056000 Sobic002G056000 Sobic003G349000--Sobic002G056000 Sobic001G466600 Sobic001G466600 Sobic010G241600--Sobic001G466600 Sobic010G241600--Sobic010G237800 Sobic010G241600--Sobic003G282700 Sobic010G241600--Sobic001G141700 Sobic006G106200 Sobic006G106200 Sobic010G241600--Sobic006G106200 Sobic004G350200 Sobic004G350200 Sobic010G241600--Sobic004G350200 Sobic010G241600--Sobic002G312800 Sobic010G241600--Sobic003G349000 Sobic010G021900 Sobic010G021900 Sobic010G241600--Sobic010G021900 Sobic007G053700--Sobic002G154400 Sobic007G053700--Sobic003G349000 Sobic009G190200 Sobic009G190200 Sobic007G053700--Sobic009G190200 Sobic007G053700--Sobic003G282700 Sobic009G235200 Sobic009G235200 Sobic007G053700--Sobic009G235200 Sobic005G114101 Sobic005G114101 Sobic007G053700--Sobic005G114101 Sobic002G009800 Sobic002G009800 Sobic007G053700--Sobic002G009800 Sobic007G053700--Sobic002G312800 Sobic002G053200 Sobic002G053200 Sobic007G053700--Sobic002G053200 Sobic004G030600 Sobic004G030600 Sobic004G027700--Sobic004G030600 Sobic004G027700--Sobic003G282700 Sobic003G359400 Sobic003G359400 Sobic004G027700--Sobic003G359400 Sobic003G067201 Sobic003G067201 Sobic004G027700--Sobic003G067201 Sobic006G089900 Sobic006G089900 Sobic004G027700--Sobic006G089900 Sobic008G031200 Sobic008G031200 Sobic004G027700--Sobic008G031200 Sobic005G034200 Sobic005G034200 Sobic004G027700--Sobic005G034200 Sobic007G039300 Sobic007G039300 Sobic004G027700--Sobic007G039300 Sobic004G027700--Sobic001G039300 Sobic008G070700 Sobic008G070700 Sobic003G072500--Sobic008G070700 Sobic003G393100 Sobic003G393100 Sobic003G072500--Sobic003G393100 Sobic009G057800 Sobic009G057800 Sobic003G072500--Sobic009G057800 Sobic002G112000 Sobic002G112000 Sobic003G072500--Sobic002G112000 Sobic001G175100 Sobic001G175100 Sobic003G072500--Sobic001G175100 Sobic003G072500--Sobic006G106200 Sobic002G317700 Sobic002G317700 Sobic003G072500--Sobic002G317700 Sobic007G161600 Sobic007G161600 Sobic003G072500--Sobic007G161600 Sobic003G129500 Sobic003G129500 Sobic003G072500--Sobic003G129500 Sobic002G154400--Sobic009G042100 Sobic002G154400--Sobic007G039300 Sobic002G154400--Sobic007G053700 Sobic002G154400--Sobic003G349000 Sobic010G240800 Sobic010G240800 Sobic002G154400--Sobic010G240800 Sobic004G020900 Sobic004G020900 Sobic002G154400--Sobic004G020900 Sobic009G032200 Sobic009G032200 Sobic002G154400--Sobic009G032200 Sobic008G017900 Sobic008G017900 Sobic002G154400--Sobic008G017900 Sobic009G069200 Sobic009G069200 Sobic002G154400--Sobic009G069200 Sobic003G369700 Sobic003G369700 Sobic001G177400--Sobic003G369700 Sobic006G094000 Sobic006G094000 Sobic001G177400--Sobic006G094000 Sobic003G198080 Sobic003G198080 Sobic001G177400--Sobic003G198080 Sobic001G450200 Sobic001G450200 Sobic001G177400--Sobic001G450200 Sobic006G155300 Sobic006G155300 Sobic001G177400--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic001G177400--Sobic001G469300 Sobic004G322500 Sobic004G322500 Sobic001G177400--Sobic004G322500 Sobic001G164700 Sobic001G164700 Sobic001G177400--Sobic001G164700 Sobic004G020150 Sobic004G020150 Sobic001G177400--Sobic004G020150 Sobic003G289700 Sobic003G289700 Sobic010G237800--Sobic003G289700 Sobic010G237800--Sobic008G070700 Sobic001G158300 Sobic001G158300 Sobic010G237800--Sobic001G158300 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic002G374200 Sobic002G374200 Sobic010G237800--Sobic002G374200 Sobic010G212700 Sobic010G212700 Sobic010G237800--Sobic010G212700 Sobic007G153700 Sobic007G153700 Sobic010G237800--Sobic007G153700 Sobic002G196500 Sobic002G196500 Sobic010G237800--Sobic002G196500
Octagon: transcription factors


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