Gene annotation
Transcriptome id Sobic.001G141700.1
Synonym Sb01g012330
Functional annotation acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed
UniProt C5WQ99
Pfam -
Panther DB PTHR11375 PTHR11375:SF7
NCBI CDD -
KEGG Orthology K18647; acidic leucine-rich nuclear phosphoprotein 32 family member B
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50690 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os03g46600.1 : acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a017138 , Zm00025a021101 , Zm00025a001239 , Zm00025a007520
Brachypodium -
Barley -
Wheat TraesCS4D02G018000 , TraesCS4A02G293800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G141700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293400 prostatic spermine-binding protein precursor, putative, expressed -
2 Sobic.003G349000 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
3 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
4 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
5 Sobic.002G003000 expressed protein -
6 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
7 Sobic.008G022200 RNA-binding zinc finger protein, putative, expressed -
8 Sobic.003G282700 protein kri1, putative, expressed K14786: protein KRI1
9 Sobic.001G399600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.003G220500 TTL1, putative, expressed -
11 Sobic.006G140300 expressed protein -
12 Sobic.003G014900 expressed protein -
13 Sobic.007G153700 transcription regulator, putative, expressed -
14 Sobic.003G411400 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
15 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
16 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
17 Sobic.003G189800 expressed protein K14291: phosphorylated adapter RNA export protein
18 Sobic.002G389500 h/ACA ribonucleoprotein complex subunit 4, putative, expressed K11131: DKC1, NOLA4, H/ACA ribonucleoprotein complex subunit 4
19 Sobic.004G167700 pectinesterase inhibitor domain containing protein, putative, expressed -
20 Sobic.002G387600 expressed protein -


Gene co-expression network
sample Sobic001G141700 Sobic001G141700 Sobic002G293400 Sobic002G293400 Sobic001G141700--Sobic002G293400 Sobic003G349000 Sobic003G349000 Sobic001G141700--Sobic003G349000 Sobic010G237800 Sobic010G237800 Sobic001G141700--Sobic010G237800 Sobic010G241600 Sobic010G241600 Sobic001G141700--Sobic010G241600 Sobic002G003000 Sobic002G003000 Sobic001G141700--Sobic002G003000 Sobic001G158300 Sobic001G158300 Sobic001G141700--Sobic001G158300 Sobic008G022200 Sobic008G022200 Sobic001G141700--Sobic008G022200 Sobic003G282700 Sobic003G282700 Sobic001G141700--Sobic003G282700 Sobic001G399600 Sobic001G399600 Sobic001G141700--Sobic001G399600 Sobic002G293400--Sobic001G141700 Sobic002G240400 Sobic002G240400 Sobic002G293400--Sobic002G240400 Sobic001G541500 Sobic001G541500 Sobic002G293400--Sobic001G541500 Sobic004G068200 Sobic004G068200 Sobic002G293400--Sobic004G068200 Sobic002G293400--Sobic003G349000 Sobic002G293400--Sobic003G282700 Sobic002G293400--Sobic010G241600 Sobic002G293400--Sobic010G237800 Sobic009G172100 Sobic009G172100 Sobic002G293400--Sobic009G172100 Sobic002G154400 Sobic002G154400 Sobic003G349000--Sobic002G154400 Sobic002G312800 Sobic002G312800 Sobic003G349000--Sobic002G312800 Sobic003G349000--Sobic001G141700 Sobic003G349000--Sobic003G282700 Sobic007G053700 Sobic007G053700 Sobic003G349000--Sobic007G053700 Sobic003G349000--Sobic010G237800 Sobic009G042100 Sobic009G042100 Sobic003G349000--Sobic009G042100 Sobic003G349000--Sobic010G241600 Sobic002G056000 Sobic002G056000 Sobic003G349000--Sobic002G056000 Sobic003G289700 Sobic003G289700 Sobic010G237800--Sobic003G289700 Sobic008G070700 Sobic008G070700 Sobic010G237800--Sobic008G070700 Sobic010G237800--Sobic001G158300 Sobic006G106200 Sobic006G106200 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic002G374200 Sobic002G374200 Sobic010G237800--Sobic002G374200 Sobic010G212700 Sobic010G212700 Sobic010G237800--Sobic010G212700 Sobic007G153700 Sobic007G153700 Sobic010G237800--Sobic007G153700 Sobic002G196500 Sobic002G196500 Sobic010G237800--Sobic002G196500 Sobic001G466600 Sobic001G466600 Sobic010G241600--Sobic001G466600 Sobic010G241600--Sobic010G237800 Sobic010G241600--Sobic003G282700 Sobic010G241600--Sobic001G141700 Sobic010G241600--Sobic006G106200 Sobic004G350200 Sobic004G350200 Sobic010G241600--Sobic004G350200 Sobic010G241600--Sobic002G312800 Sobic010G241600--Sobic003G349000 Sobic010G021900 Sobic010G021900 Sobic010G241600--Sobic010G021900 Sobic002G003000--Sobic001G141700 Sobic003G014900 Sobic003G014900 Sobic002G003000--Sobic003G014900 Sobic005G032400 Sobic005G032400 Sobic002G003000--Sobic005G032400 Sobic002G009800 Sobic002G009800 Sobic002G003000--Sobic002G009800 Sobic002G003000--Sobic007G053700 Sobic003G415100 Sobic003G415100 Sobic002G003000--Sobic003G415100 Sobic005G180800 Sobic005G180800 Sobic002G003000--Sobic005G180800 Sobic002G003000--Sobic001G399600 Sobic002G003000--Sobic002G154400 Sobic006G272800 Sobic006G272800 Sobic001G158300--Sobic006G272800 Sobic002G284100 Sobic002G284100 Sobic001G158300--Sobic002G284100 Sobic001G158300--Sobic008G070700 Sobic010G003300 Sobic010G003300 Sobic001G158300--Sobic010G003300 Sobic001G468000 Sobic001G468000 Sobic001G158300--Sobic001G468000 Sobic002G027600 Sobic002G027600 Sobic001G158300--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic001G158300--Sobic004G267600 Sobic001G158300--Sobic002G196500 Sobic001G158300--Sobic010G237800 Sobic009G047000 Sobic009G047000 Sobic008G022200--Sobic009G047000 Sobic006G142500 Sobic006G142500 Sobic008G022200--Sobic006G142500 Sobic005G018050 Sobic005G018050 Sobic008G022200--Sobic005G018050 Sobic009G127800 Sobic009G127800 Sobic008G022200--Sobic009G127800 Sobic008G022200--Sobic006G272800 Sobic009G225500 Sobic009G225500 Sobic008G022200--Sobic009G225500 Sobic006G278000 Sobic006G278000 Sobic008G022200--Sobic006G278000 Sobic010G275800 Sobic010G275800 Sobic008G022200--Sobic010G275800 Sobic008G022200--Sobic002G284100 Sobic007G188200 Sobic007G188200 Sobic003G282700--Sobic007G188200 Sobic003G282700--Sobic003G349000 Sobic003G282700--Sobic010G241600 Sobic003G282700--Sobic007G053700 Sobic004G027700 Sobic004G027700 Sobic003G282700--Sobic004G027700 Sobic003G072500 Sobic003G072500 Sobic003G282700--Sobic003G072500 Sobic003G282700--Sobic002G154400 Sobic001G177400 Sobic001G177400 Sobic003G282700--Sobic001G177400 Sobic003G282700--Sobic010G237800 Sobic010G180200 Sobic010G180200 Sobic001G399600--Sobic010G180200 Sobic006G140300 Sobic006G140300 Sobic001G399600--Sobic006G140300 Sobic007G167300 Sobic007G167300 Sobic001G399600--Sobic007G167300 Sobic004G014100 Sobic004G014100 Sobic001G399600--Sobic004G014100 Sobic009G254000 Sobic009G254000 Sobic001G399600--Sobic009G254000 Sobic001G399600--Sobic010G237800 Sobic006G143300 Sobic006G143300 Sobic001G399600--Sobic006G143300 Sobic003G363300 Sobic003G363300 Sobic001G399600--Sobic003G363300 Sobic008G176300 Sobic008G176300 Sobic001G399600--Sobic008G176300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.