Gene annotation
Transcriptome id Sobic.003G411400.2,Sobic.003G411400.3
Synonym KYP, Sb03g044580, SUVH4, SDG33
Functional annotation histone-lysine N-methyltransferase, putative, expressed
UniProt A0A1W0W181 , A0A1W0W183
Pfam PF05033 PF02182 PF00856 PF05033 PF02182
Panther DB PTHR22884 PTHR22884:SF352
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0005515; protein binding GO:0018024histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0018024histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G13960 : SU(VAR)3-9 homolog 4
RAP-DB (Rice) LOC_Os01g70220.1 : histone-lysine N-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a039233 , Zm00025a026200
Brachypodium PNT71382 , KQK11317
Barley HORVU3Hr1G096250.17 , HORVU3Hr1G096250.16 , HORVU3Hr1G096250.15 , HORVU3Hr1G096250.14 , HORVU3Hr1G096250.13 , HORVU3Hr1G096250.12 , HORVU3Hr1G096250.11 , HORVU3Hr1G096250.10 , HORVU3Hr1G096250.19 , HORVU3Hr1G096250.18 , HORVU3Hr1G096250.9 , HORVU3Hr1G096250.8 , HORVU3Hr1G096250.6 , HORVU3Hr1G096250.2 , HORVU3Hr1G096250.1 , HORVU3Hr1G096250.28 , HORVU3Hr1G096250.29 , HORVU3Hr1G096250.26 , HORVU3Hr1G096250.27 , HORVU3Hr1G096250.24 , HORVU3Hr1G096250.25 , HORVU3Hr1G096250.22 , HORVU3Hr1G096250.23 , HORVU3Hr1G096250.20 , HORVU3Hr1G096250.21 , HORVU3Hr1G096250.7 , HORVU3Hr1G096250.5 , HORVU3Hr1G096250.4 , HORVU3Hr1G096250.3
Wheat TraesCS3D02G433900 , TraesCS3D02G433900 , TraesCS3A02G441200 , TraesCS3A02G441200
Populus -


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cDNA sequences
Sobic.003G411400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
2 Sobic.008G088800 expressed protein -
3 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
4 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
5 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
6 Sobic.001G398400 expressed protein -
7 Sobic.004G035800 uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.004G198100 expressed protein -
9 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
10 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
11 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
12 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
13 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
14 Sobic.006G160200 MSP domain containing protein, expressed -
15 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
16 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
17 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
18 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
19 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.003G387700 expressed protein -


Gene co-expression network
sample Sobic003G411400 Sobic003G411400 Sobic003G393100 Sobic003G393100 Sobic003G411400--Sobic003G393100 Sobic008G088800 Sobic008G088800 Sobic003G411400--Sobic008G088800 Sobic003G204200 Sobic003G204200 Sobic003G411400--Sobic003G204200 Sobic010G255000 Sobic010G255000 Sobic003G411400--Sobic010G255000 Sobic007G008300 Sobic007G008300 Sobic003G411400--Sobic007G008300 Sobic001G398400 Sobic001G398400 Sobic003G411400--Sobic001G398400 Sobic004G035800 Sobic004G035800 Sobic003G411400--Sobic004G035800 Sobic004G198100 Sobic004G198100 Sobic003G411400--Sobic004G198100 Sobic001G175100 Sobic001G175100 Sobic003G411400--Sobic001G175100 Sobic009G184200 Sobic009G184200 Sobic003G393100--Sobic009G184200 Sobic002G204400 Sobic002G204400 Sobic003G393100--Sobic002G204400 Sobic003G369200 Sobic003G369200 Sobic003G393100--Sobic003G369200 Sobic003G393100--Sobic001G398400 Sobic008G148000 Sobic008G148000 Sobic003G393100--Sobic008G148000 Sobic006G281400 Sobic006G281400 Sobic003G393100--Sobic006G281400 Sobic008G070700 Sobic008G070700 Sobic003G393100--Sobic008G070700 Sobic007G007800 Sobic007G007800 Sobic003G393100--Sobic007G007800 Sobic004G321400 Sobic004G321400 Sobic003G393100--Sobic004G321400 Sobic010G070900 Sobic010G070900 Sobic008G088800--Sobic010G070900 Sobic003G010700 Sobic003G010700 Sobic008G088800--Sobic003G010700 Sobic010G168700 Sobic010G168700 Sobic008G088800--Sobic010G168700 Sobic008G088800--Sobic001G175100 Sobic005G168400 Sobic005G168400 Sobic008G088800--Sobic005G168400 Sobic001G143400 Sobic001G143400 Sobic008G088800--Sobic001G143400 Sobic006G163300 Sobic006G163300 Sobic008G088800--Sobic006G163300 Sobic001G455900 Sobic001G455900 Sobic008G088800--Sobic001G455900 Sobic004G003700 Sobic004G003700 Sobic008G088800--Sobic004G003700 Sobic002G237000 Sobic002G237000 Sobic003G204200--Sobic002G237000 Sobic003G204200--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic003G204200--Sobic001G105800 Sobic003G204200--Sobic010G255000 Sobic003G204200--Sobic004G035800 Sobic009G172950 Sobic009G172950 Sobic003G204200--Sobic009G172950 Sobic010G092400 Sobic010G092400 Sobic003G204200--Sobic010G092400 Sobic004G190500 Sobic004G190500 Sobic003G204200--Sobic004G190500 Sobic002G223900 Sobic002G223900 Sobic003G204200--Sobic002G223900 Sobic007G147200 Sobic007G147200 Sobic010G255000--Sobic007G147200 Sobic001G101700 Sobic001G101700 Sobic010G255000--Sobic001G101700 Sobic007G201900 Sobic007G201900 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G220800 Sobic010G220800 Sobic010G255000--Sobic010G220800 Sobic001G295400 Sobic001G295400 Sobic007G008300--Sobic001G295400 Sobic007G008300--Sobic009G172950 Sobic004G108400 Sobic004G108400 Sobic007G008300--Sobic004G108400 Sobic007G008300--Sobic001G105800 Sobic003G320300 Sobic003G320300 Sobic007G008300--Sobic003G320300 Sobic007G008300--Sobic009G184200 Sobic007G008300--Sobic007G007800 Sobic001G377700 Sobic001G377700 Sobic007G008300--Sobic001G377700 Sobic003G055600 Sobic003G055600 Sobic007G008300--Sobic003G055600 Sobic003G260700 Sobic003G260700 Sobic001G398400--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic001G398400--Sobic001G170800 Sobic008G006800 Sobic008G006800 Sobic001G398400--Sobic008G006800 Sobic001G398400--Sobic009G184200 Sobic004G271300 Sobic004G271300 Sobic001G398400--Sobic004G271300 Sobic005G005700 Sobic005G005700 Sobic001G398400--Sobic005G005700 Sobic010G105400 Sobic010G105400 Sobic001G398400--Sobic010G105400 Sobic001G398400--Sobic004G198100 Sobic004G257600 Sobic004G257600 Sobic001G398400--Sobic004G257600 Sobic002G345800 Sobic002G345800 Sobic004G035800--Sobic002G345800 Sobic010G183800 Sobic010G183800 Sobic004G035800--Sobic010G183800 Sobic004G035800--Sobic003G204200 Sobic005G163500 Sobic005G163500 Sobic004G035800--Sobic005G163500 Sobic004G035800--Sobic010G255000 Sobic001G171200 Sobic001G171200 Sobic004G035800--Sobic001G171200 Sobic001G101900 Sobic001G101900 Sobic004G035800--Sobic001G101900 Sobic001G463301 Sobic001G463301 Sobic004G035800--Sobic001G463301 Sobic004G035800--Sobic002G237000 Sobic004G198100--Sobic003G260700 Sobic010G119300 Sobic010G119300 Sobic004G198100--Sobic010G119300 Sobic004G198100--Sobic001G398400 Sobic008G125700 Sobic008G125700 Sobic004G198100--Sobic008G125700 Sobic004G198100--Sobic004G257600 Sobic004G198100--Sobic001G170800 Sobic004G339500 Sobic004G339500 Sobic004G198100--Sobic004G339500 Sobic002G313000 Sobic002G313000 Sobic004G198100--Sobic002G313000 Sobic004G198100--Sobic004G271300 Sobic001G175100--Sobic008G070700 Sobic001G175100--Sobic004G003700 Sobic001G175100--Sobic004G198100 Sobic006G221800 Sobic006G221800 Sobic001G175100--Sobic006G221800 Sobic001G175100--Sobic001G101700 Sobic001G175100--Sobic008G088800 Sobic001G175100--Sobic007G147200 Sobic001G175100--Sobic001G143400 Sobic008G138000 Sobic008G138000 Sobic001G175100--Sobic008G138000
Octagon: transcription factors


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