Gene annotation
Transcriptome id Sobic.003G220500.1
Synonym Sb03g027890, TTL1
Functional annotation TTL1, putative, expressed
UniProt C5XR15
Pfam PF00085 PF07719 PF13414
Panther DB PTHR22904 PTHR22904:SF297
NCBI CDD KOG0548; Molecular co-chaperone STI1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53300 : tetratricopetide-repeat thioredoxin-like 1
RAP-DB (Rice) LOC_Os01g42960.1 : TTL1, putative, expressed
MaizeGDB (Corn) Zm00025a028738 , Zm00025a038509
Brachypodium KQK08729 , KQK04621 , KQK04620 , KQK04622 , KQK04624
Barley HORVU3Hr1G054240.14 , HORVU3Hr1G054240.3 , HORVU3Hr1G054240.4 , HORVU3Hr1G054240.5 , HORVU3Hr1G054240.2 , HORVU3Hr1G054240.1 , HORVU3Hr1G054240.6 , HORVU3Hr1G054240.7 , HORVU3Hr1G054240.8 , HORVU3Hr1G054240.9 , HORVU3Hr1G054240.10 , HORVU3Hr1G054240.12 , HORVU3Hr1G054240.13 , HORVU3Hr1G054240.15 , HORVU1Hr1G093390.2 , HORVU1Hr1G093390.6
Wheat TraesCS1B02G462300 , TraesCS3A02G221800 , TraesCS1D02G437100 , TraesCS1D02G437100 , TraesCS3D02G231300 , TraesCS3B02G251600 , TraesCS1A02G427400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
2 Sobic.006G142500 protein kinase, putative, expressed -
3 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
5 Sobic.001G540700 expressed protein -
6 Sobic.002G383100 expressed protein -
7 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
10 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
11 Sobic.009G127800 BZIP protein, putative, expressed -
12 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
13 Sobic.007G197100 expressed protein -
14 Sobic.005G143100 expressed protein -
15 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
16 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
17 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
18 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.004G164700 expressed protein -
20 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic003G220500 Sobic003G220500 Sobic009G172950 Sobic009G172950 Sobic003G220500--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic003G220500--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G220500--Sobic001G296100 Sobic002G284100 Sobic002G284100 Sobic003G220500--Sobic002G284100 Sobic001G540700 Sobic001G540700 Sobic003G220500--Sobic001G540700 Sobic002G383100 Sobic002G383100 Sobic003G220500--Sobic002G383100 Sobic001G487200 Sobic001G487200 Sobic003G220500--Sobic001G487200 Sobic001G452900 Sobic001G452900 Sobic003G220500--Sobic001G452900 Sobic004G267600 Sobic004G267600 Sobic003G220500--Sobic004G267600 Sobic003G183700 Sobic003G183700 Sobic009G172950--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G184200 Sobic009G184200 Sobic009G172950--Sobic009G184200 Sobic004G321400 Sobic004G321400 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic010G086000 Sobic010G086000 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic006G272500 Sobic006G272500 Sobic001G296100--Sobic006G272500 Sobic001G499200 Sobic001G499200 Sobic001G296100--Sobic001G499200 Sobic009G124800 Sobic009G124800 Sobic001G296100--Sobic009G124800 Sobic001G296100--Sobic006G142500 Sobic003G283600 Sobic003G283600 Sobic001G296100--Sobic003G283600 Sobic001G290500 Sobic001G290500 Sobic001G296100--Sobic001G290500 Sobic004G315700 Sobic004G315700 Sobic001G296100--Sobic004G315700 Sobic001G296100--Sobic001G487200 Sobic001G372900 Sobic001G372900 Sobic001G296100--Sobic001G372900 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic002G284100--Sobic010G086000 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic004G207000 Sobic004G207000 Sobic001G540700--Sobic004G207000 Sobic001G540700--Sobic004G267600 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic003G289800 Sobic003G289800 Sobic002G383100--Sobic003G289800 Sobic002G383100--Sobic009G087000 Sobic001G051300 Sobic001G051300 Sobic002G383100--Sobic001G051300 Sobic010G147700 Sobic010G147700 Sobic002G383100--Sobic010G147700 Sobic003G017500 Sobic003G017500 Sobic002G383100--Sobic003G017500 Sobic003G179500 Sobic003G179500 Sobic002G383100--Sobic003G179500 Sobic002G383100--Sobic003G032200 Sobic002G383100--Sobic003G183700 Sobic002G383100--Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G452900--Sobic010G086000 Sobic010G241100 Sobic010G241100 Sobic001G452900--Sobic010G241100 Sobic004G108400 Sobic004G108400 Sobic001G452900--Sobic004G108400 Sobic001G452900--Sobic010G192500 Sobic001G452900--Sobic006G142500 Sobic001G452900--Sobic003G032200 Sobic001G452900--Sobic002G284100 Sobic001G452900--Sobic004G267600 Sobic001G452900--Sobic009G172950 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600
Octagon: transcription factors


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