Gene annotation
Transcriptome id Sobic.002G003000.1
Synonym Sb02g000450
Functional annotation expressed protein
UniProt C5X742
Pfam PF09756
Panther DB PTHR13270 PTHR13270:SF4
NCBI CDD KOG3054; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27120 : -
RAP-DB (Rice) LOC_Os07g01320.1 : expressed protein
MaizeGDB (Corn) Zm00025a044840
Brachypodium KQK21237 , KQK21236
Barley HORVU2Hr1G064470.3 , HORVU2Hr1G064470.1 , HORVU2Hr1G064470.7 , HORVU2Hr1G064470.6 , HORVU2Hr1G064470.5 , HORVU2Hr1G064470.4 , HORVU2Hr1G064470.9 , HORVU2Hr1G064470.8 , HORVU2Hr1G064470.13 , HORVU2Hr1G064470.12 , HORVU2Hr1G064470.11 , HORVU2Hr1G064470.10
Wheat TraesCS2B02G285200 , TraesCS2B02G285200 , TraesCS2A02G257300 , TraesCS2A02G257300
Populus -


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cDNA sequences
Sobic.002G003000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141700 acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed K18647: acidic leucine-rich nuclear phosphoprotein 32 family member B
2 Sobic.003G014900 expressed protein -
3 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
4 Sobic.002G009800 VIP4, putative, expressed K15177: RNA polymerase-associated protein LEO1
5 Sobic.007G053700 MYB family transcription factor, putative, expressed -
6 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
7 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
8 Sobic.001G399600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
9 Sobic.002G154400 MIM, putative, expressed -
10 Sobic.010G170900 expressed protein -
11 Sobic.010G197800 expressed protein -
12 Sobic.007G153700 transcription regulator, putative, expressed -
13 Sobic.010G262900 expressed protein -
14 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
15 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
16 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
17 Sobic.009G194700 IQ calmodulin-binding motif family protein, putative, expressed -
18 Sobic.009G190200 transcription elongation factor SPT5 homolog 1, putative, expressed -
19 Sobic.003G206600 glycine-rich protein, putative, expressed -
20 Sobic.004G288100 HSPC171 protein, putative, expressed -


Gene co-expression network
sample Sobic002G003000 Sobic002G003000 Sobic001G141700 Sobic001G141700 Sobic002G003000--Sobic001G141700 Sobic003G014900 Sobic003G014900 Sobic002G003000--Sobic003G014900 Sobic005G032400 Sobic005G032400 Sobic002G003000--Sobic005G032400 Sobic002G009800 Sobic002G009800 Sobic002G003000--Sobic002G009800 Sobic007G053700 Sobic007G053700 Sobic002G003000--Sobic007G053700 Sobic003G415100 Sobic003G415100 Sobic002G003000--Sobic003G415100 Sobic005G180800 Sobic005G180800 Sobic002G003000--Sobic005G180800 Sobic001G399600 Sobic001G399600 Sobic002G003000--Sobic001G399600 Sobic002G154400 Sobic002G154400 Sobic002G003000--Sobic002G154400 Sobic002G293400 Sobic002G293400 Sobic001G141700--Sobic002G293400 Sobic003G349000 Sobic003G349000 Sobic001G141700--Sobic003G349000 Sobic010G237800 Sobic010G237800 Sobic001G141700--Sobic010G237800 Sobic010G241600 Sobic010G241600 Sobic001G141700--Sobic010G241600 Sobic001G141700--Sobic002G003000 Sobic001G158300 Sobic001G158300 Sobic001G141700--Sobic001G158300 Sobic008G022200 Sobic008G022200 Sobic001G141700--Sobic008G022200 Sobic003G282700 Sobic003G282700 Sobic001G141700--Sobic003G282700 Sobic001G141700--Sobic001G399600 Sobic001G384600 Sobic001G384600 Sobic003G014900--Sobic001G384600 Sobic001G228400 Sobic001G228400 Sobic003G014900--Sobic001G228400 Sobic004G207000 Sobic004G207000 Sobic003G014900--Sobic004G207000 Sobic009G031500 Sobic009G031500 Sobic003G014900--Sobic009G031500 Sobic006G126600 Sobic006G126600 Sobic003G014900--Sobic006G126600 Sobic002G053200 Sobic002G053200 Sobic003G014900--Sobic002G053200 Sobic005G177900 Sobic005G177900 Sobic003G014900--Sobic005G177900 Sobic010G170900 Sobic010G170900 Sobic003G014900--Sobic010G170900 Sobic001G393401 Sobic001G393401 Sobic003G014900--Sobic001G393401 Sobic003G004500 Sobic003G004500 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G050600 Sobic005G050600 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic003G206600 Sobic003G206600 Sobic002G009800--Sobic003G206600 Sobic003G138900 Sobic003G138900 Sobic002G009800--Sobic003G138900 Sobic002G388500 Sobic002G388500 Sobic002G009800--Sobic002G388500 Sobic009G182600 Sobic009G182600 Sobic002G009800--Sobic009G182600 Sobic002G009800--Sobic007G053700 Sobic009G126300 Sobic009G126300 Sobic002G009800--Sobic009G126300 Sobic007G004000 Sobic007G004000 Sobic002G009800--Sobic007G004000 Sobic009G105800 Sobic009G105800 Sobic002G009800--Sobic009G105800 Sobic008G017900 Sobic008G017900 Sobic002G009800--Sobic008G017900 Sobic007G053700--Sobic002G154400 Sobic007G053700--Sobic003G349000 Sobic009G190200 Sobic009G190200 Sobic007G053700--Sobic009G190200 Sobic007G053700--Sobic003G282700 Sobic009G235200 Sobic009G235200 Sobic007G053700--Sobic009G235200 Sobic005G114101 Sobic005G114101 Sobic007G053700--Sobic005G114101 Sobic007G053700--Sobic002G009800 Sobic002G312800 Sobic002G312800 Sobic007G053700--Sobic002G312800 Sobic007G053700--Sobic002G053200 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic005G180800--Sobic003G415100 Sobic002G103700 Sobic002G103700 Sobic005G180800--Sobic002G103700 Sobic001G218200 Sobic001G218200 Sobic005G180800--Sobic001G218200 Sobic006G261100 Sobic006G261100 Sobic005G180800--Sobic006G261100 Sobic009G166200 Sobic009G166200 Sobic005G180800--Sobic009G166200 Sobic004G313300 Sobic004G313300 Sobic005G180800--Sobic004G313300 Sobic005G180800--Sobic001G384600 Sobic005G180800--Sobic005G032400 Sobic002G247200 Sobic002G247200 Sobic005G180800--Sobic002G247200 Sobic001G399600--Sobic010G180200 Sobic006G140300 Sobic006G140300 Sobic001G399600--Sobic006G140300 Sobic007G167300 Sobic007G167300 Sobic001G399600--Sobic007G167300 Sobic004G014100 Sobic004G014100 Sobic001G399600--Sobic004G014100 Sobic009G254000 Sobic009G254000 Sobic001G399600--Sobic009G254000 Sobic001G399600--Sobic010G237800 Sobic006G143300 Sobic006G143300 Sobic001G399600--Sobic006G143300 Sobic003G363300 Sobic003G363300 Sobic001G399600--Sobic003G363300 Sobic008G176300 Sobic008G176300 Sobic001G399600--Sobic008G176300 Sobic009G042100 Sobic009G042100 Sobic002G154400--Sobic009G042100 Sobic007G039300 Sobic007G039300 Sobic002G154400--Sobic007G039300 Sobic002G154400--Sobic007G053700 Sobic002G154400--Sobic003G349000 Sobic010G240800 Sobic010G240800 Sobic002G154400--Sobic010G240800 Sobic004G020900 Sobic004G020900 Sobic002G154400--Sobic004G020900 Sobic009G032200 Sobic009G032200 Sobic002G154400--Sobic009G032200 Sobic002G154400--Sobic008G017900 Sobic002G154400--Sobic009G069200
Octagon: transcription factors


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