Gene annotation
Transcriptome id Sobic.004G288100.1
Synonym Sb04g032370
Functional annotation HSPC171 protein, putative, expressed
UniProt C5Y1D3
Pfam PF05620
Panther DB PTHR13505 PTHR13505:SF7
NCBI CDD KOG3269; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23940 : Protein of unknown function (DUF788)
RAP-DB (Rice) LOC_Os02g44690.1 : HSPC171 protein, putative, expressed
MaizeGDB (Corn) Zm00025a032253
Brachypodium KQK00710
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G083800 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
2 Sobic.002G329700 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
3 Sobic.002G129200 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
4 Sobic.001G052900 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.001G370500 expressed protein K14851: RRP17, ribosomal RNA-processing protein 17
6 Sobic.010G088600 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
7 Sobic.001G498400 - K18655: DDX19, ATP-dependent RNA helicase DDX19/DBP5
8 Sobic.002G003000 expressed protein -
9 Sobic.002G278600 peptidyl-prolyl cis-trans isomerase, putative, expressed -
10 Sobic.001G465300 splicing factor, putative, expressed -
11 Sobic.002G159500 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
12 Sobic.002G088100 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10
13 Sobic.010G260400 rpp14 family protein, expressed K03537: ribonuclease P/MRP protein subunit POP5
14 Sobic.003G304700 AGAP003732-PA, putative, expressed -
15 Sobic.002G046300 expressed protein -
16 Sobic.006G129000 ATP/GTP binding protein, putative, expressed -
17 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
18 Sobic.007G123900 WD-40 repeat family protein, putative, expressed -
19 Sobic.005G102500 expressed protein -
20 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -


Gene co-expression network
sample Sobic004G288100 Sobic004G288100 Sobic002G083800 Sobic002G083800 Sobic004G288100--Sobic002G083800 Sobic002G329700 Sobic002G329700 Sobic004G288100--Sobic002G329700 Sobic002G129200 Sobic002G129200 Sobic004G288100--Sobic002G129200 Sobic001G052900 Sobic001G052900 Sobic004G288100--Sobic001G052900 Sobic001G370500 Sobic001G370500 Sobic004G288100--Sobic001G370500 Sobic010G088600 Sobic010G088600 Sobic004G288100--Sobic010G088600 Sobic001G498400 Sobic001G498400 Sobic004G288100--Sobic001G498400 Sobic002G003000 Sobic002G003000 Sobic004G288100--Sobic002G003000 Sobic002G278600 Sobic002G278600 Sobic004G288100--Sobic002G278600 Sobic002G083800--Sobic004G288100 Sobic002G083800--Sobic002G129200 Sobic003G280300 Sobic003G280300 Sobic002G083800--Sobic003G280300 Sobic001G465300 Sobic001G465300 Sobic002G083800--Sobic001G465300 Sobic003G031200 Sobic003G031200 Sobic002G083800--Sobic003G031200 Sobic003G186700 Sobic003G186700 Sobic002G083800--Sobic003G186700 Sobic004G069500 Sobic004G069500 Sobic002G083800--Sobic004G069500 Sobic002G083800--Sobic002G329700 Sobic002G083800--Sobic001G052900 Sobic002G088100 Sobic002G088100 Sobic002G329700--Sobic002G088100 Sobic002G329700--Sobic002G278600 Sobic003G396800 Sobic003G396800 Sobic002G329700--Sobic003G396800 Sobic003G295700 Sobic003G295700 Sobic002G329700--Sobic003G295700 Sobic004G010700 Sobic004G010700 Sobic002G329700--Sobic004G010700 Sobic010G241600 Sobic010G241600 Sobic002G329700--Sobic010G241600 Sobic002G329700--Sobic004G288100 Sobic006G120200 Sobic006G120200 Sobic002G329700--Sobic006G120200 Sobic006G129000 Sobic006G129000 Sobic002G329700--Sobic006G129000 Sobic002G129200--Sobic003G031200 Sobic010G220900 Sobic010G220900 Sobic002G129200--Sobic010G220900 Sobic002G359900 Sobic002G359900 Sobic002G129200--Sobic002G359900 Sobic006G011000 Sobic006G011000 Sobic002G129200--Sobic006G011000 Sobic003G436500 Sobic003G436500 Sobic002G129200--Sobic003G436500 Sobic001G382200 Sobic001G382200 Sobic002G129200--Sobic001G382200 Sobic002G129200--Sobic004G010700 Sobic002G129200--Sobic002G083800 Sobic009G201800 Sobic009G201800 Sobic002G129200--Sobic009G201800 Sobic010G198700 Sobic010G198700 Sobic001G052900--Sobic010G198700 Sobic007G182500 Sobic007G182500 Sobic001G052900--Sobic007G182500 Sobic009G057500 Sobic009G057500 Sobic001G052900--Sobic009G057500 Sobic001G106400 Sobic001G106400 Sobic001G052900--Sobic001G106400 Sobic006G096300 Sobic006G096300 Sobic001G052900--Sobic006G096300 Sobic009G041301 Sobic009G041301 Sobic001G052900--Sobic009G041301 Sobic004G225800 Sobic004G225800 Sobic001G052900--Sobic004G225800 Sobic009G199300 Sobic009G199300 Sobic001G052900--Sobic009G199300 Sobic004G341100 Sobic004G341100 Sobic001G052900--Sobic004G341100 Sobic004G068200 Sobic004G068200 Sobic001G370500--Sobic004G068200 Sobic001G370500--Sobic004G288100 Sobic010G262800 Sobic010G262800 Sobic001G370500--Sobic010G262800 Sobic001G466600 Sobic001G466600 Sobic001G370500--Sobic001G466600 Sobic001G429800 Sobic001G429800 Sobic001G370500--Sobic001G429800 Sobic001G453800 Sobic001G453800 Sobic001G370500--Sobic001G453800 Sobic001G370500--Sobic002G088100 Sobic008G088812 Sobic008G088812 Sobic001G370500--Sobic008G088812 Sobic002G312800 Sobic002G312800 Sobic001G370500--Sobic002G312800 Sobic001G389900 Sobic001G389900 Sobic010G088600--Sobic001G389900 Sobic009G153600 Sobic009G153600 Sobic010G088600--Sobic009G153600 Sobic002G196350 Sobic002G196350 Sobic010G088600--Sobic002G196350 Sobic009G149800 Sobic009G149800 Sobic010G088600--Sobic009G149800 Sobic001G066700 Sobic001G066700 Sobic010G088600--Sobic001G066700 Sobic002G159500 Sobic002G159500 Sobic010G088600--Sobic002G159500 Sobic003G403400 Sobic003G403400 Sobic010G088600--Sobic003G403400 Sobic004G205000 Sobic004G205000 Sobic010G088600--Sobic004G205000 Sobic003G191500 Sobic003G191500 Sobic010G088600--Sobic003G191500 Sobic008G058700 Sobic008G058700 Sobic001G498400--Sobic008G058700 Sobic003G382900 Sobic003G382900 Sobic001G498400--Sobic003G382900 Sobic002G385300 Sobic002G385300 Sobic001G498400--Sobic002G385300 Sobic006G261100 Sobic006G261100 Sobic001G498400--Sobic006G261100 Sobic008G111700 Sobic008G111700 Sobic001G498400--Sobic008G111700 Sobic001G498400--Sobic003G031200 Sobic003G407900 Sobic003G407900 Sobic001G498400--Sobic003G407900 Sobic003G189700 Sobic003G189700 Sobic001G498400--Sobic003G189700 Sobic002G276900 Sobic002G276900 Sobic001G498400--Sobic002G276900 Sobic001G141700 Sobic001G141700 Sobic002G003000--Sobic001G141700 Sobic003G014900 Sobic003G014900 Sobic002G003000--Sobic003G014900 Sobic005G032400 Sobic005G032400 Sobic002G003000--Sobic005G032400 Sobic002G009800 Sobic002G009800 Sobic002G003000--Sobic002G009800 Sobic007G053700 Sobic007G053700 Sobic002G003000--Sobic007G053700 Sobic003G415100 Sobic003G415100 Sobic002G003000--Sobic003G415100 Sobic005G180800 Sobic005G180800 Sobic002G003000--Sobic005G180800 Sobic001G399600 Sobic001G399600 Sobic002G003000--Sobic001G399600 Sobic002G154400 Sobic002G154400 Sobic002G003000--Sobic002G154400 Sobic004G350200 Sobic004G350200 Sobic002G278600--Sobic004G350200 Sobic010G059700 Sobic010G059700 Sobic002G278600--Sobic010G059700 Sobic002G278600--Sobic002G329700 Sobic002G306600 Sobic002G306600 Sobic002G278600--Sobic002G306600 Sobic002G278600--Sobic006G120200 Sobic002G278600--Sobic003G396800 Sobic008G050700 Sobic008G050700 Sobic002G278600--Sobic008G050700 Sobic010G038900 Sobic010G038900 Sobic002G278600--Sobic010G038900 Sobic009G063800 Sobic009G063800 Sobic002G278600--Sobic009G063800
Octagon: transcription factors


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